CASP4 Meeting Program

Asilomar Conference Center
800 Asilomar Boulevard, Pacific Grove,
California

December 3 - 7th, 2000



All talks in Chapel, unless otherwise noted

 

Sunday December 3rd

 

3.00 - 6.00

Registration

 

6:00

Dinner

 

7:15

The CASP4 Experiment

John Moult

7:50

The CAFASP2 Experiment

Dani Fischer

8:20

CASP4 Evaluation Methods

Krzysztof Fidelis and
Adam Zemla

8:50

CASP 4 Prediction Targets

Tim Hubbard

9:05

Discussion

 

9:15

Mixer

Fred Farr Forum

 


Monday December 4th - Comparative Modeling Day

8:30

Analysis of Comparative Modeling Predictions

Anna Tramontano

 

Presentations by Comparative Modeling Groups:

   

9:30

G126 Michael Sternberg (not the speaker)

9:50

G406 Ceslovas Venclovas

10:10

Break

 

Comparative Modeling Methods:

10:35

Alignment

 

11:15

Side Chains

 

12:00

Lunch

 

1:00

Livermore Prediction Center Town Hall Meeting

Chair: Krzysztof Fidelis

3:00 - 6:00

Posters and Demonstrations

Fred Farr Forum/ Kiln

6:00

Dinner

 

7:15

Loop Modeling

 

8:00

The Future of Comparative Modeling

(Round Table & Discussion)

Topic 1

How do we make correct alignments?

Chair: David Baker

Topic 2

What Refinement methods will work?

Chair: Peter Kollman

9:15

Bar

 

 

Tuesday December 5th - Fold Recognition

8:30

Analysis of Fold Recognition Predictions

Manfred Sippl

     

Presentations by Fold Recognition Groups:

     

9:30

G384

Alexey Murzin

9:50

G094

Kevin Karplus

10:10

G095

Tom Blundell

10:30

Break

 

11:00

G031

Leszek Rychlewski

11:20

G381

SBfold

11:40

G359

CAFASP Consensus

12:00

Lunch

 

1:00

The CAFASP2 Experiment

Chair: Dani Fischer

3:00 - 6:00

Posters and Demonstrations

Fred Farr Forum/ Kiln

6:00

Dinner

 

7:15

Discussion of Fold Recognition

Chair: Manfred Sippl

9:15

Bar

 

 

Wednesday December 6th - New Folds Methods Day

 

8:30

Analysis of "New Fold" Results

Arthur Lesk

     

Presentations by "New Fold" Methods Groups:

     

9:10

G354

David Baker

9:30

G001

David Shortle

9:50

G080

Jeff Skolnick

10:10

Break

 

10:40

G414

Richard A. Friesner

11:00

G392

Rita Casadio

11:20

Analysis of Secondary Structure Prediction

Loredana LoConte

11:40

Discussion on secondary structure prediction

 

12:00

Lunch

 

1:00

CASP Community Meeting

Chair: John Moult

3:00 - 6:00

Posters and Demonstrations

Fred Farr Forum/ Kiln

6:00

Dinner

 

7:15

The Future of New Fold Methods (Round Table & Discussion)

 

Topic 1

Distinguishing correct models

Chair: Michael Levitt

Topic 2

Fragment assembly

Chair: David Jones

Topic 3

Secondary vs. tertiary structure prediction

Chair: Burkhard Rost

9:15

Bar

 

 

Thursday December 7th - What are we learning about proteins? (Debate Format)

 

8:30

The Origins of Secondary Structure

Franc Avbelj, George Rose, Ken Dill

Discussion

9:30

Electrostatics and Hydrophobicity

Barry Honig, Teresa Head-Gordon

Discussion

10:30

Break

   

11:00

Do folding pathways help?

Harold Scheraga, David Osguthorpe

Discussion

12:00

Lunch

   

1:00

Conference ends

   


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