13th Community Wide Experiment on the
Critical Assessment of Techniques for Protein Structure Prediction
Target List csv
 
Targets expire on the specified date at noon (12:00) local time in California (GMT - 7 hours).

Green color - active target; Yellow color - target expires within 48 hours; Orange color - target expires within 24 hours; Red color - target has expired for server TS/RR predictions, but is still open for QA predictions. Refinement and data-assisted targets are highlighted with the light grey background.

* targets selected for CAPRI experiment
All targets Regular Heteromers Refinement Assisted structure prediction
All groups | Server only
#
Tar-id
Type
Res
Stoi-
chiom.
Entry
Date
Server
Expiration
QA
Expiration
Human
Expiration
Description
1. T0949 All groups 183 A1 2018-05-01 2018-05-04 m1: 2018-05-08
m2: 2018-05-10
2018-05-21 B7JAQ5_ACIF2
2. T0950 Server only 353 An 2018-05-02 2018-05-05 m1: 2018-05-09
m2: 2018-05-11
2018-05-15
canceled on
2018-05-14
PaxB
PDB code 6ek4
Reclassified to server only (paper released before the human deadline)
3. T0951 Server only 276 A1 2018-05-03 2018-05-09 m1: 2018-05-13
m2: 2018-05-15
2018-05-15 ShHTL7
PDB code 5z82
4. T0952 All groups 35 A2 2018-05-03 2018-05-06
canceled on
2018-05-04
m1: 2018-05-10
m2: 2018-05-12
2018-05-24
canceled on
2018-05-04
O48503
Canceled: paper released before the prediction deadline.
5. H0953 All groups 321 A3B1 2018-05-04 2018-05-07 - 2018-05-25 Adhesin tip
6. T0953s1 All groups 72 A1 2018-05-04 2018-05-10 m1: 2018-05-14
m2: 2018-05-16
2018-05-25 Adhesin tip
7. T0953s2 All groups 249 A1 2018-05-04 2018-05-10 m1: 2018-05-14
m2: 2018-05-16
2018-05-25 Adhesin tip
8. T0954 All groups 350 A1 2018-05-07 2018-05-13 m1: 2018-05-17
m2: 2018-05-19
2018-05-28 RFWD3_HUMAN
PDB code 6cvz
9. T0955 All groups 41 A1 2018-05-08 2018-05-14 m1: 2018-05-18
m2: 2018-05-20
2018-05-29 gHEEE_02
PDB code 5w9f
10. T0956 All groups 178 A1 2018-05-08 2018-05-14 m1: 2018-05-18
m2: 2018-05-20
2018-05-29 K0A2T3
11. H0957 All groups 327 A1B1 2018-05-09 2018-05-15 - 2018-05-30 CdiA_CdiI-CPX200209
12. T0957s1 All groups 163 A1 2018-05-09 2018-05-15 m1: 2018-05-19
m2: 2018-05-21
2018-05-30 CdiA_CdiI-CPX200209
13. T0957s2 All groups 164 A1 2018-05-09 2018-05-15 m1: 2018-05-19
m2: 2018-05-21
2018-05-30 CdiA_CdiI-CPX200209
14. T0958 All groups 96 A1 2018-05-10 2018-05-15 m1: 2018-05-19
m2: 2018-05-21
2018-05-31 LP1413
PDB code 6btc
15. T0959 All groups 189 A1 2018-05-10 2018-05-15 m1: 2018-05-19
m2: 2018-05-21
2018-06-05 Endolysin ARW58837.1
16. T0960 All groups 384 A3 2018-05-11 2018-05-16 m1: 2018-05-20
m2: 2018-05-22
2018-06-05 PALES_06171
PDB code 6cl5
17. T0963 All groups 372 A3 2018-05-15 2018-05-18 m1: 2018-05-22
m2: 2018-05-24
2018-06-05 PA0620
PDB code 6cl6
18. T0964 All groups 184 A1 2018-05-16 2018-05-19 m1: 2018-05-23
m2: 2018-05-25
2018-06-06 CBM56
19. T0965 * All groups 334 A2 2018-05-16 2018-05-19 m1: 2018-05-23
m2: 2018-05-25
2018-06-06 NADP reductase
PDB code 6d2v
20. T0966 * All groups 494 A2 2018-05-17 2018-05-20 m1: 2018-05-24
m2: 2018-05-26
2018-06-07 Ras/Rap1 site-specific endopeptidase
PDB code 5w6l
21. T0967 Server only 81 A1 2018-05-17 2018-05-20 m1: 2018-05-24
m2: 2018-05-26
2018-05-26 MamB, Magnetosome protein
22. H0968 All groups 242 A2B2 2018-05-18 2018-05-21 - 2018-06-08 B5Y0C2
23. T0968s1 All groups 126 A1 2018-05-18 2018-05-21 m1: 2018-05-25
m2: 2018-05-27
2018-06-08 B5Y0C2
24. T0968s2 All groups 116 A1 2018-05-18 2018-05-21 m1: 2018-05-25
m2: 2018-05-27
2018-06-08 B5Y0C2
25. T0961 * All groups 505 A4 2018-05-21 2018-05-24 m1: 2018-05-28
m2: 2018-05-30
2018-06-11 Q6MJ59
26. T0962 Server only 220 A1 2018-05-21 2018-05-24 m1: 2018-05-28
m2: 2018-05-30
2018-05-30 Endolysin KPP12
27. S0949 Assisted - A1 2018-05-22 2018-05-25 - 2018-06-10 This is a SAXS-assisted target. The data were collected on the full length protein. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html  
28. T0969 All groups 487 A1 2018-05-22 2018-05-25 m1: 2018-05-29
m2: 2018-05-31
2018-06-12 XOAT1
29. T0970 All groups 97 A2 2018-05-23 2018-05-26 m1: 2018-05-30
m2: 2018-06-01
2018-06-13 Q6ZWB6
30. T0971 Server only 186 A1 2018-05-23 2018-05-26 m1: 2018-05-30
m2: 2018-06-01
2018-06-02 nuclear transport factor 2
PDB code 6d34
31. T0972 All groups 106 A1 2018-05-24 2018-05-27 m1: 2018-05-31
m2: 2018-06-02
2018-06-14 Q0P914_CAMJE
32. T0973 * All groups 146 A2 2018-05-24 2018-05-27 m1: 2018-05-31
m2: 2018-06-02
2018-06-14 Bacteriophage ESE058 coat protein
33. H0974 * All groups 167 A1B1 2018-05-25 2018-05-28 - 2018-06-15 O48503/O48504
34. T0974s1 All groups 72 A1 2018-05-25 2018-05-28 m1: 2018-06-01
m2: 2018-06-03
2018-06-15 O48503/O48504
35. T0974s2 Server only 95 A1 2018-05-25 2018-05-28 m1: 2018-06-01
m2: 2018-06-03
2018-06-03 O48503/O48504
36. S0953 Assisted - A3B1 2018-05-29 2018-06-01 - 2018-06-12 This is a SAXS-assisted target. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html  
37. S0953s1 Assisted - A1 2018-05-29 2018-06-01 - 2018-06-12 This is a SAXS-assisted target representing the first subunit of the H0953 heteromer. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html  
38. S0953s2 Assisted - A1 2018-05-29 2018-06-01 - 2018-06-12 This is a SAXS-assisted target representing the second subunit of the H0953 heteromer. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html  
39. T0975 All groups 343 A1 2018-05-29 2018-06-01 m1: 2018-06-05
m2: 2018-06-07
2018-06-19 EXO5
40. T0976 * All groups 252 A2 2018-05-29 2018-06-01 m1: 2018-06-05
m2: 2018-06-07
2018-06-19 Rhodanese-like family protein
41. T0977 All groups 566 A3 2018-05-30 2018-06-02 m1: 2018-06-06
m2: 2018-06-08
2018-06-20 YP_004957431.1
42. R0949 Refinement - - 2018-05-31 2018-06-03 - 2018-06-21 Starting model's GDT_HA=49. Residues 1-42, 96-105 and 182-183 are not ordered in the crystal structure and deleted from the starting model. The structure contains a bound Cu ion.  
43. S0957 Assisted - A1B1 2018-05-31 2018-06-03 - 2018-06-14 This is a SAXS-assisted target. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html  
44. S0957s1 Assisted - A1 2018-05-31 2018-06-03 - 2018-06-14 This is a SAXS-assisted target representing the first subunit of the H0957 heteromer. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html  
45. S0957s2 Assisted - A1 2018-05-31 2018-06-03 - 2018-06-14 This is a SAXS-assisted target representing the second subunit of the H0953 heteromer. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html  
46. T0978 Server only 416 A1 2018-05-31 2018-06-03 m1: 2018-06-07
m2: 2018-06-09
2018-06-09 DpdA, WP_001542917.1
47. T0979 All groups 98 A3 2018-05-31 2018-06-03 m1: 2018-06-07
m2: 2018-06-09
2018-06-21 A0A0G1XU35_9BACT
48. H0980 All groups 163 A2B2 2018-06-01 2018-06-04 - 2018-06-22 Q3KP22-3; Q8NHR7
49. R0958 Refinement - - 2018-06-01 2018-06-04 - 2018-06-17 Canceled - paper appeared online.  
50. T0980s1 All groups 111 A1 2018-06-01 2018-06-04 m1: 2018-06-08
m2: 2018-06-10
2018-06-22 Q3KP22-3; Q8NHR7
51. T0980s2 All groups 52 A1 2018-06-01 2018-06-04 m1: 2018-06-08
m2: 2018-06-10
2018-06-22 Q3KP22-3; Q8NHR7
52. T0981 All groups 640 A3 2018-06-04 2018-06-07 m1: 2018-06-11
m2: 2018-06-13
2018-06-25 gp146
53. R0957s2 Refinement - - 2018-06-05 2018-06-08 - 2018-06-26 Starting model's GDT_HA=39. Residues 1-6 are absent from the target structure and deleted from the starting model.  
54. R0959 Refinement - - 2018-06-05 2018-06-08 - 2018-06-25 Starting model's GDT_HA=45.  
55. T0982 Server only 283 A1 2018-06-05 2018-06-08 m1: 2018-06-12
m2: 2018-06-14
2018-06-16 DynU16
56. T0983 * All groups 245 A2 2018-06-05 2018-06-08 m1: 2018-06-12
m2: 2018-06-14
2018-06-26 Cals10
57. R0962 Refinement - - 2018-06-06 2018-06-09 - 2018-06-27 Starting model's GDT_HA=63 (on residues 2-178). Residues 1 and 179-220 are absent from the target and deleted from the starting model.  
58. T0984 * All groups 752 A2 2018-06-06 2018-06-09 m1: 2018-06-13
m2: 2018-06-15
2018-06-27 Q8NHX9
59. T0985 All groups 863 A1 2018-06-07 2018-06-10 m1: 2018-06-14
m2: 2018-06-16
2018-06-28 ACL_1061
60. H0986 All groups 251 A1B1 2018-06-08 2018-06-11 - 2018-06-29 Toxic C-Terminal Tip of CdiA and Immune Protein
61. T0986s1 All groups 96 A1 2018-06-08 2018-06-11 m1: 2018-06-15
m2: 2018-06-17
2018-06-29 Toxic C-Terminal Tip of CdiA and Immune Protein
62. T0986s2 All groups 155 A1 2018-06-08 2018-06-11 m1: 2018-06-15
m2: 2018-06-17
2018-06-29 Toxic C-Terminal Tip of CdiA and Immune Protein
63. S0968 Assisted - A2B2 2018-06-11 2018-06-14 - 2018-06-25 This is a SAXS-assisted target corresponding to H0968 complex. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html  
64. S0968s1 Assisted - A1 2018-06-11 2018-06-14 - 2018-06-25 This is a SAXS-assisted target representing the first subunit of the H0968 heteromer. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html  
65. S0968s2 Assisted - A1 2018-06-11 2018-06-14 - 2018-06-25 This is a SAXS-assisted target representing the second subunit of the H0968 heteromer. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html  
66. T0987 All groups 405 A1 2018-06-11 2018-06-14 m1: 2018-06-18
m2: 2018-06-20
2018-07-02 Enterococcal surface protein
67. T0988 * All groups 204 A3 2018-06-12 2018-06-15
canceled on
2018-06-29
m1: 2018-06-19
m2: 2018-06-21
2018-07-03
canceled on
2018-06-29
YP_006383572
Canceled: identical to T0881 in CASP12
68. T0989 All groups 246 A3 2018-06-12 2018-06-15 m1: 2018-06-19
m2: 2018-06-21
2018-07-03 Q6XQB2.1
69. X0953 Assisted - A3B1 2018-06-12 2018-06-15 - 2018-07-01 This is a cross-linking assisted modeling target. The data were collected on the whole heteromeric complex.
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/.

To access raw XL-MS data for this target (whole complex), please go to https://www.ebi.ac.uk/pride/archive/projects/PXD010094
and use the following credentials to login:
Username: reviewer70721@ebi.ac.uk
Password: M9rdkSXT

Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf.  

70. X0953s1 Assisted - A1 2018-06-12 2018-06-15 - 2018-07-01 This is a cross-linking assisted modeling target (subunit 1 of the heterocomplex). The data were collected on the whole heteromeric complex.
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/.

To access raw XL-MS data for this target (whole complex), please go to https://www.ebi.ac.uk/pride/archive/projects/PXD010094
and use the following credentials to login:
Username: reviewer70721@ebi.ac.uk
Password: M9rdkSXT

Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf.  

71. X0953s2 Assisted - A1 2018-06-12 2018-06-15 - 2018-07-01 This is a cross-linking assisted modeling target (subunit 2 of the heterocomplex). The data were collected on the whole heteromeric complex.
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/.

To access raw XL-MS data for this target (whole complex), please go to https://www.ebi.ac.uk/pride/archive/projects/PXD010094
and use the following credentials to login:
Username: reviewer70721@ebi.ac.uk
Password: M9rdkSXT

Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf.  

72. T0990 All groups 552 A1 2018-06-13 2018-06-16 m1: 2018-06-20
m2: 2018-06-22
2018-07-04 NS1
73. R0968s1 Refinement - - 2018-06-14 2018-06-17 - 2018-07-04 Starting model's GDT_HA=45. Residues 1-5 and 124-126 are absent from the target structure and deleted from the starting model.  
74. R0968s2 Refinement - - 2018-06-14 2018-06-17 - 2018-07-04 Starting model's GDT_HA=50.  
75. T0991 All groups 118 A2 2018-06-14 2018-06-17 m1: 2018-06-21
m2: 2018-06-23
2018-07-05 Bacteriophage ESE001 coat protein
76. T0992 All groups 126 A1 2018-06-14 2018-06-17 m1: 2018-06-21
m2: 2018-06-23
2018-07-05 Q6MKZ7
77. X0957 Assisted - A1B1 2018-06-14 2018-06-17 - 2018-07-02 This is a cross-linking assisted modeling target. The data were collected on the whole heteromeric complex.
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/.

To access raw XL-MS data for this target (whole complex), please go to https://www.ebi.ac.uk/pride/archive/projects/PXD010003
and use the following credentials to login:
Username: reviewer44414@ebi.ac.uk
Password: wbhw7G4Q

Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf  

78. X0957s1 Assisted - A1 2018-06-14 2018-06-17 - 2018-07-02 This is a cross-linking assisted modeling target (subunit 1 of the heterocomplex). The data were collected on the whole heteromeric complex.
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/.

To access raw XL-MS data for this target (whole complex), please go to https://www.ebi.ac.uk/pride/archive/projects/PXD010003
and use the following credentials to login:
Username: reviewer44414@ebi.ac.uk
Password: wbhw7G4Q

Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf  

79. X0957s2 Assisted - A1 2018-06-14 2018-06-17 - 2018-07-02 This is a cross-linking assisted modeling target (subunit 2 of the heterocomplex). The data were collected on the whole heteromeric complex.
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/

To access raw XL-MS data for this target (whole complex), please go to https://www.ebi.ac.uk/pride/archive/projects/PXD010003
and use the following credentials to login:
Username: reviewer44414@ebi.ac.uk
Password: wbhw7G4Q

Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf  

80. H0993 * All groups 378 A2B2 2018-06-15 2018-06-18 - 2018-07-06 MlaFA
81. T0993s1 All groups 269 A1 2018-06-15 2018-06-18 m1: 2018-06-22
m2: 2018-06-24
2018-07-06 MlaFA
82. T0993s2 All groups 109 A1 2018-06-15 2018-06-18 m1: 2018-06-22
m2: 2018-06-24
2018-07-06 MlaFA
83. T0994 All groups 585 A1 2018-06-18 2018-06-21 m1: 2018-06-25
m2: 2018-06-27
2018-07-09 Q79ER8_STAAU
84. T0995 * All groups 330 A8 2018-06-19 2018-06-22 m1: 2018-06-26
m2: 2018-06-28
2018-07-10 UniProtKB - B3GNT7 (B3GNT7_BACPU)
85. T0996 All groups 848 A6 2018-06-20 2018-06-23 m1: 2018-06-27
m2: 2018-06-29
2018-07-11 YebT
86. T0997 * All groups 228 A2 2018-06-21 2018-06-24 m1: 2018-06-28
m2: 2018-06-30
2018-07-12 Q6MN59
87. T0998 All groups 166 A2 2018-06-21 2018-06-24 m1: 2018-06-28
m2: 2018-06-30
2018-07-12 Bacteripohage AVE016 coat protein
88. R0974s1 Refinement - - 2018-06-22 2018-06-25 - 2018-07-13 Starting model's GDT_HA=66. Residues 1 and 71-72 are absent from the target structure and deleted from the starting model.  
89. S0980 Assisted - A2B2 2018-06-22 2018-06-25 - 2018-07-08 This is a SAXS-assisted target representing the H0980 heteromer. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html  
90. S0980s1 Assisted - A1 2018-06-22 2018-06-25 - 2018-07-08 This is a SAXS-assisted target representing the first subunit of the H0980 heteromer. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html  
91. S0980s2 Assisted - A1 2018-06-22 2018-06-25 - 2018-07-08 This is a SAXS-assisted target representing the second subunit of the H0980 heteromer. The data were collected on the full heteromeric complex. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html  
92. T0999 * All groups 1589 A2 2018-06-22 2018-06-25 m1: 2018-06-29
m2: 2018-07-01
2018-07-13 G0S061_CHATD
93. S0975 Assisted - A1 2018-06-25 2018-06-28 - 2018-07-14 This is a SAXS-assisted target. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html  
94. T1000 All groups 523 A2 2018-06-25 2018-06-28 m1: 2018-07-02
m2: 2018-07-04
2018-07-16 D-galactarate dehydrogenase
95. S0981 Assisted - A3 2018-06-26 2018-06-29 - 2018-07-15 This is a SAXS-assisted target. Experimental results are generated on the expressed protein with a tag (not provided in the released CASP sequence). The residues not included in the CASP target are encompassed in brackets in the full sequence below: [MGSSHHHHHHSSGLVPRGSHMASMTGGQQMGRGS] MAFNYTPLTETQKLKDMYPKVNDIGN FLKTEVNLSDVKQISQPDFNNILASIPDSGNYYVTNSKGAPSGEATAGFVRLDKRNVNYY KIYYSPYSSNKMYIKTYANGTVYDWISFKLDEGSLYNEGNTLNVKELTESTTQYATLVNP PKENLNTGWVNYKESKNGVSSLVEFNPVNSTSTFKMIRKLPVQEQKPNLLKDSLFVYPET SYSNIKTDNWDTPPFWGYSSNSGRSGVRFRGENTVQIDDGSDTYPSVVSNRFKMGKELSV GDTVTVSVYAKINDPALLKDNLVYFELAGYDTVDDTSKNPYTGGRREITASEITTEWKKY SFTFTIPENTIGASGVKVNYVSLLLRMNCSSSKGNGAVVYYALPKLEKSSKVTPFITHEN DVRKYDEIWSNWQEVISKDELKGHSPVDIEYNDYFKYQWWKSEVNEKSLKDLAMTVPQGY HTFYCQGSIAGTPKGRSIRGTIQVDYDKGDPYRANKFVKLLFTDTEGIPYTLYYGGYNQG WKPLKQSETSTLLWKGTLDFGSTEAVNLNDSLDNYDLIEVTYWTRSAGHFSTKRLDIKNT SNLLYIRDFNISNDSTGSSVDFFEGYCTFPTRTSVQPGMVKSITLDGSTNTTKVASWNEK ERIKVYNIMGINRG The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html.  
96. T1001 All groups 140 A2 2018-06-26 2018-06-29 m1: 2018-07-03
m2: 2018-07-05
2018-07-17 Q6MIM9
97. T1002 All groups 270 A1 2018-06-26 2018-06-29 m1: 2018-07-03
m2: 2018-07-05
2018-07-17 Q184J8
98. X0968 Assisted - A2B2 2018-06-26 2018-06-29 - 2018-07-15 This is a cross-linking assisted modeling target. The data were collected on the whole heteromeric complex.
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/.

To access raw XL-MS data for this target (whole complex), please go to https://www.ebi.ac.uk/pride/archive/projects/PXD010003
and use the following credentials to login:
Username: reviewer91348@ebi.ac.uk
Password: q9fEUNmI

Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf  

99. X0968s1 Assisted - A1 2018-06-26 2018-06-29 - 2018-07-15 This is a cross-linking assisted modeling target (subunit 1 of the heterocomplex). The data were collected on the whole heteromeric complex.
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/.

To access raw XL-MS data for this target (whole complex), please go to https://www.ebi.ac.uk/pride/archive/projects/PXD010003
and use the following credentials to login:
Username: reviewer91348@ebi.ac.uk
Password: q9fEUNmI

Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf  

100. X0968s2 Assisted - A1 2018-06-26 2018-06-29 - 2018-07-15 This is a cross-linking assisted modeling target (subunit 2 of the heterocomplex). The data were collected on the whole heteromeric complex.
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/.

To access raw XL-MS data for this target (whole complex), please go to https://www.ebi.ac.uk/pride/archive/projects/PXD010003
and use the following credentials to login:
Username: reviewer91348@ebi.ac.uk
Password: q9fEUNmI

Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf  

101. T1003 * All groups 474 A2 2018-06-27 2018-06-30 m1: 2018-07-04
m2: 2018-07-06
2018-07-17 ALAS2
102. T1004 All groups 458 A3 2018-06-28 2018-07-01 m1: 2018-07-05
m2: 2018-07-07
2018-07-19 YP_009041344.1
103. S0985 Assisted - A1 2018-06-29 2018-07-02 - 2018-07-18 This is a SAXS-assisted target. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html  
104. T1005 All groups 364 A1 2018-06-29 2018-07-02 m1: 2018-07-06
m2: 2018-07-08
2018-07-20 BT1044
105. A0953 Assisted - A3B1 2018-07-02 2018-07-05 - 2018-07-23 This is a SANS-assisted target for the H0953 heteromer. With this target we want to explore (in a non-competitive mode) the added value of small-angle neutron scattering data for structure prediction.

The data were collected on the full heteromeric complex. They are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/A0953_SANS*

The description of the data can be found at http://predictioncenter.org/casp13/doc/SANS-SG_AM_tutorial.pdf  

106. T1006 * All groups 79 A2 2018-07-02 2018-07-05 m1: 2018-07-09
m2: 2018-07-11
2018-07-23 >MamM magnetosome protein
107. T1007 All groups 149 A1 2018-07-02 2018-07-05 m1: 2018-07-09
m2: 2018-07-11
2018-07-23 Proline-rich acidic protein 1
108. R0981-D4 Refinement - - 2018-07-03 2018-07-06 - 2018-07-24 This refinement target corresponds to domain 4 (res. 403-513) of T0981. Starting model's GDT_HA=45 (calculated on residues belonging to the domain). Please remember that the original target is a homotrimer. The interface in the starting model is modeled reasonably accurate.  
109. R0981-D5 Refinement - - 2018-07-03 2018-07-06 - 2018-07-24 This refinement target corresponds to domain 5 (res. 514-640) of T0981. Starting model's GDT_HA=42 (calculated on residues belonging to the domain). Please remember that the original target is a homotrimer. Residues 605-623 are a part of a homotrimer interface and modeling of this segment can be improved the most.  
110. T1008 All groups 80 A1 2018-07-03 2018-07-06 m1: 2018-07-10
m2: 2018-07-12
2018-07-24 UW_engnr
111. T1009 * All groups 718 A2 2018-07-03 2018-07-06 m1: 2018-07-10
m2: 2018-07-12
2018-07-24 A2QTU5.1
112. R0981-D3 Refinement - - 2018-07-05 2018-07-08 - 2018-07-26 This refinement target corresponds to domain 3 (res. 191-393) of T0981. Starting model's GDT_HA=32 (calculated on residues belonging to the domain). Please remember that the original target is a homotrimer. The interface in the starting model is modeled reasonably accurate.  
113. S0987 Assisted - A1 2018-07-05 2018-07-08 - 2018-07-22 This is a SAXS-assisted target. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html  
114. T1010 All groups 210 A2 2018-07-05 2018-07-08 m1: 2018-07-12
m2: 2018-07-14
2018-07-26 B2BM43
115. x0957 Assisted - A1B1 2018-07-05 2018-07-08 - 2018-07-25 This is a cross-linking assisted modeling target. The data were acquired by J.Rappsilber's group on the whole heteromeric complex. The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/x0957_Berlin.csv.

Note that this target name starts from the lowercase 'x', while cross-linking targets from A. Leitner's group start from the capital 'X'.

The cross-linker is heterobifunctional and reacts on one side with the side chains of K, S, T, Y via the amide and hydroxyl group, respectively. On the other side the cross-linker reacts indiscriminately with any C-H and N-H bond, be it in the side chain or backbone of any amino acid. The reported distance limit (25 Angstroms) is the estimated upper limit between the CAs of corresponding residues. The last column provides an estimated confidence level for the contact to be correct. The confidence score is derived from a false discovery rate (FDR) estimation. For example at 0.95, we estimate that the likely incidence of mismatch is at 5%.  

116. x0957s1 Assisted - A1 2018-07-05 2018-07-08 - 2018-07-25 This is a cross-linking assisted modeling target (subunit 1 of the heterocomplex). The data were acquired by J.Rappsilber's group on the whole heteromeric complex. The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/x0957_Berlin.csv.

Note that this target name starts from the lowercase 'x', while cross-linking targets from A. Leitner's group start from the capital 'X'.

The cross-linker is heterobifunctional and reacts on one side with the side chains of K, S, T, Y via the amide and hydroxyl group, respectively. On the other side the cross-linker reacts indiscriminately with any C-H and N-H bond, be it in the side chain or backbone of any amino acid. The reported distance limit (25 Angstroms) is the estimated upper limit between the CAs of corresponding residues. The last column provides an estimated confidence level for the contact to be correct. The confidence score is derived from a false discovery rate (FDR) estimation. For example at 0.95, we estimate that the likely incidence of mismatch is at 5%.  

117. x0957s2 Assisted - A1 2018-07-05 2018-07-08 - 2018-07-25 This is a cross-linking assisted modeling target (subunit 2 of the heterocomplex). The data were acquired by J.Rappsilber's group on the whole heteromeric complex. The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/x0957_Berlin.csv.

Note that this target name starts from the lowercase 'x', while cross-linking targets from A. Leitner's group start from the capital 'X'.

The cross-linker is heterobifunctional and reacts on one side with the side chains of K, S, T, Y via the amide and hydroxyl group, respectively. On the other side the cross-linker reacts indiscriminately with any C-H and N-H bond, be it in the side chain or backbone of any amino acid. The reported distance limit (25 Angstroms) is the estimated upper limit between the CAs of corresponding residues. The last column provides an estimated confidence level for the contact to be correct. The confidence score is derived from a false discovery rate (FDR) estimation. For example at 0.95, we estimate that the likely incidence of mismatch is at 5%.  

118. R0977-D2 Refinement - - 2018-07-06 2018-07-09 - 2018-07-27 This refinement target corresponds to domain 2 (res. 360-563) of T0977. Starting model's GDT_HA=68 (calculated on residues belonging to the domain). Please remember that the original target is a homotrimer. The interface in the starting model is modeled reasonably accurate.  
119. S0992 Assisted - A1 2018-07-06 2018-07-09 - 2018-07-22 This is a SAXS-assisted target. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html  
120. T1011 All groups 534 A1 2018-07-06 2018-07-09 m1: 2018-07-13
m2: 2018-07-15
2018-07-27 UNK1
121. T1012 All groups 199 A1 2018-07-06 2018-07-09 m1: 2018-07-13
m2: 2018-07-15
2018-07-27 Puromycin N-acetyltransferase
122. R0986s1 Refinement - - 2018-07-09 2018-07-12 - 2018-07-30 Starting model's GDT_HA=59. Residues 1-4 are absent from the target structure and deleted from the starting model.  
123. R0986s2 Refinement - - 2018-07-09 2018-07-12 - 2018-07-30 Starting model's GDT_HA=49.  
124. T1013 All groups 537 A1 2018-07-09 2018-07-12 m1: 2018-07-16
m2: 2018-07-18
2018-07-28 UNK2
125. T1014 All groups 276 A1 2018-07-09 2018-07-12 m1: 2018-07-16
m2: 2018-07-18
2018-07-28 WP_010918027.1
126. H1015 * All groups 218 A1B1 2018-07-10 2018-07-13 - 2018-07-29 CDI_213
127. T1015s1 All groups 89 A1 2018-07-10 2018-07-13 m1: 2018-07-17
m2: 2018-07-19
2018-07-29 CDI_213
128. T1015s2 All groups 129 A1 2018-07-10 2018-07-13 m1: 2018-07-17
m2: 2018-07-19
2018-07-29 CDI_213
129. T1016 All groups 203 A2 2018-07-10 2018-07-13 m1: 2018-07-17
m2: 2018-07-19
2018-07-29 IDP96117
130. H1017 * All groups 240 A1B1 2018-07-11 2018-07-14 - 2018-07-30 201_INDD4
131. R0992 Refinement - - 2018-07-11 2018-07-14 - 2018-08-01 Starting model's GDT_HA=65. Residues 1-3, 111-126 are absent from the target and deleted from the starting model.  
132. T1017s1 All groups 111 A1 2018-07-11 2018-07-14 m1: 2018-07-18
m2: 2018-07-20
2018-07-30 201_INDD4
133. T1017s2 All groups 129 A1 2018-07-11 2018-07-14 m1: 2018-07-18
m2: 2018-07-20
2018-07-30 201_INDD4
134. T1018 All groups 334 A2 2018-07-11 2018-07-14 m1: 2018-07-18
m2: 2018-07-20
2018-07-30 IDP04388
135. H1019 * All groups 146 A1B1 2018-07-12 2018-07-15 - 2018-07-31 CDI207t
136. T1019s1 All groups 58 A1 2018-07-12 2018-07-15 m1: 2018-07-19
m2: 2018-07-21
2018-07-31 CDI207t
137. T1019s2 All groups 88 A1 2018-07-12 2018-07-15 m1: 2018-07-19
m2: 2018-07-21
2018-07-31 CDI207t
138. T1020 * All groups 577 A3 2018-07-12 2018-07-15 m1: 2018-07-19
m2: 2018-07-21
2018-07-31 SLAC1
139. H1021 * All groups 798 A6B6C6 2018-07-13 2018-07-16 - 2018-08-03 Q6HAD8,Q6HAD7,Q6HAC3
140. R0989-D1 Refinement - - 2018-07-13 2018-07-16 - 2018-08-03 This refinement target corresponds to domain 1 (res. 1-134) of T0989. Starting model's GDT_HA=34 (calculated on residues belonging to the domain). Please remember that the original target is a homotrimer. There is a lot of room for improvement, especially in the N-terminus.  
141. S0999 * Assisted - A2 2018-07-13 2018-07-16 - 2018-07-31 This is a SAXS-assisted target. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/. The description of the data can be found at http://predictioncenter.org/casp13/doc/SAXS_Package_Reference_Page1.html  
142. T1021s1 All groups 149 A1 2018-07-13 2018-07-16 m1: 2018-07-20
m2: 2018-07-22
2018-08-03 Q6HAD8,Q6HAD7,Q6HAC3
143. T1021s2 All groups 354 A1 2018-07-13 2018-07-16 m1: 2018-07-20
m2: 2018-07-22
2018-08-03 Q6HAD8,Q6HAD7,Q6HAC3
144. T1021s3 All groups 295 A1 2018-07-13 2018-07-16 m1: 2018-07-20
m2: 2018-07-22
2018-08-03 Q6HAD8,Q6HAD7,Q6HAC3
145. H1022 All groups 758 A6B3 2018-07-16 2018-07-19 - 2018-08-05 Q6HAD2,Q6HAD1
146. T1022s1 All groups 229 A1 2018-07-16 2018-07-19 m1: 2018-07-23
m2: 2018-07-25
2018-08-05 Q6HAD2,Q6HAD1
147. T1022s2 All groups 529 A1 2018-07-16 2018-07-19 m1: 2018-07-23
m2: 2018-07-25
2018-08-05 Q6HAD2,Q6HAD1
148. x0968 Assisted - A2B2 2018-07-16 2018-07-19 - 2018-08-02 This is a cross-linking assisted modeling target. The data were acquired by J.Rappsilber's group on the whole heteromeric complex. The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/x0968_Berlin.csv.

Note that this target name starts from the lowercase 'x', while cross-linking targets from A. Leitner's group start from the capital 'X'.

The cross-linker is heterobifunctional and reacts on one side with the side chains of K, S, T, Y via the amide and hydroxyl group, respectively. On the other side the cross-linker reacts indiscriminately with any C-H and N-H bond, be it in the side chain or backbone of any amino acid. The reported distance limit (25 Angstroms) is the estimated upper limit between the CAs of corresponding residues. The last column provides an estimated confidence level for the contact to be correct. The confidence score is derived from a false discovery rate (FDR) estimation. For example at 0.95, we estimate that the likely incidence of mismatch is at 5%.  

149. x0968s1 Assisted - A1 2018-07-16 2018-07-19 - 2018-08-02 This is a cross-linking assisted modeling target (subunit 1 of the heterocomplex). The data were acquired by J.Rappsilber's group on the whole heteromeric complex. The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/x0968_Berlin.csv.

Note that this target name starts from the lowercase 'x', while cross-linking targets from A. Leitner's group start from the capital 'X'.

The cross-linker is heterobifunctional and reacts on one side with the side chains of K, S, T, Y via the amide and hydroxyl group, respectively. On the other side the cross-linker reacts indiscriminately with any C-H and N-H bond, be it in the side chain or backbone of any amino acid. The reported distance limit (25 Angstroms) is the estimated upper limit between the CAs of corresponding residues. The last column provides an estimated confidence level for the contact to be correct. The confidence score is derived from a false discovery rate (FDR) estimation. For example at 0.95, we estimate that the likely incidence of mismatch is at 5%.  

150. x0968s2 Assisted - A1 2018-07-16 2018-07-19 - 2018-08-02 This is a cross-linking assisted modeling target (subunit 2 of the heterocomplex). The data were acquired by J.Rappsilber's group on the whole heteromeric complex. The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/x0968_Berlin.csv.

Note that this target name starts from the lowercase 'x', while cross-linking targets from A. Leitner's group start from the capital 'X'.

The cross-linker is heterobifunctional and reacts on one side with the side chains of K, S, T, Y via the amide and hydroxyl group, respectively. On the other side the cross-linker reacts indiscriminately with any C-H and N-H bond, be it in the side chain or backbone of any amino acid. The reported distance limit (25 Angstroms) is the estimated upper limit between the CAs of corresponding residues. The last column provides an estimated confidence level for the contact to be correct. The confidence score is derived from a false discovery rate (FDR) estimation. For example at 0.95, we estimate that the likely incidence of mismatch is at 5%.  

151. X0975 Assisted - A1 2018-07-16 2018-07-19 - 2018-08-06 This is a cross-linking assisted modeling target.
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/.

To access raw XL-MS data for this target (whole complex), please go to https://www.ebi.ac.uk/pride/archive/projects/PXD010385
and use the following credentials to login:
Username: reviewer81343@ebi.ac.uk
Password: zK0BY71P

Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf  

152. H1023 All groups 1120 A1B1C1 2018-07-17 2018-07-20 - 2018-08-06 eIF2
153. T1023s1 All groups 315 A1 2018-07-17 2018-07-20 m1: 2018-07-24
m2: 2018-07-26
2018-08-06 eIF2
154. T1023s2 All groups 333 A1 2018-07-17 2018-07-20 m1: 2018-07-24
m2: 2018-07-26
2018-08-06 eIF2
155. T1023s3 All groups 472 A1 2018-07-17 2018-07-20 m1: 2018-07-24
m2: 2018-07-26
2018-08-06 eIF2
156. X0981 Assisted - A3 2018-07-17 2018-07-20 - 2018-08-07 This is a cross-linking assisted modeling target.
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/.

To access raw XL-MS data for this target (whole complex), please go to https://www.ebi.ac.uk/pride/archive/projects/PXD010384
and use the following credentials to login:
Username: reviewer66164@ebi.ac.uk
Password: S5U0kqOw

Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf  

157. R0997 Refinement - - 2018-07-18 2018-07-21 - 2018-08-08 Starting model's GDT_HA=42 (on residues 44-228). Residues 1-43 are deleted from the starting model.  
158. R0979 Refinement - - 2018-07-19 2018-07-22 - 2018-08-09 This is the first oligomeric refinement target in CASP. Being a trimer, it is somewhat longer than other refinement targets in CASP13: 276 residues total. GDT_HA of the starting model's monomeric unit is 55 (on 92 residues; residues 1-5 and 98 are absent from the experimental structure). LDDT score of the oligomeric starting model is 0.81; the inter-chain contact accuracy score F1=43%. All rules pertaining to submission of regular homo-oligomeric targets apply here.  
159. X0985 Assisted - A1 2018-07-19 2018-07-22 - 2018-08-08 This is a cross-linking assisted modeling target.
The experimental data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/.

To access raw XL-MS data for this target (whole complex), please go to https://www.ebi.ac.uk/pride/archive/projects/PXD010483
and use the following credentials to login:
Username: reviewer80816@ebi.ac.uk
Password: 4Z1QRYaH

Additional description of the method can be found at http://predictioncenter.org/casp13/doc/CASP_Webinar_XLMS.pdf  

160. N0953s2 Assisted - A1 2018-07-20 2018-07-23 - 2018-08-16 This is an NMR-simulated data-assisted target representing the second subunit of the H0953 heteromer. The data are posted at http://predictioncenter.org/download_area/CASP13/extra_experiments/.

Each zip includes five (tab-delimited) text files. E.g. T0953s2_ambiR.txt (NMR-derived ambiguous contacts) T0953s2_dihed.txt (NMR-derived ranges for phi and psi) T0953s2_ECs.txt (Evolutionary constraints) T0953s2_RDCs.txt (NMR-derived residual dipolar couplings) T0953s2_seq.txt (protein/domain sequence)

The guidelines on the NMR-assisted data can be found at http://predictioncenter.org/casp13/doc/Montelione-CASP_NMR.pdf  

161. R0999-D3 Refinement - - 2018-07-20 2018-07-23 - 2018-08-10 This refinement target corresponds to domain 3 (res. 866-1045) of T0999. Starting model's GDT_HA=54 (calculated on residues belonging to the domain). The original target is a homodimer.  
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