####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS401_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS401_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 2 - 26 4.99 11.40 LCS_AVERAGE: 51.81 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.63 15.27 LCS_AVERAGE: 18.13 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.63 15.27 LCS_AVERAGE: 13.74 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 25 3 4 4 4 6 8 10 13 15 18 19 22 23 25 25 27 30 31 33 33 LCS_GDT V 3 V 3 4 6 25 3 4 4 4 6 8 10 13 15 18 19 22 23 25 25 27 30 31 33 33 LCS_GDT Q 4 Q 4 4 6 25 3 4 4 4 6 8 10 13 15 18 19 22 23 25 25 27 30 31 33 33 LCS_GDT G 5 G 5 4 6 25 0 4 4 4 6 8 10 13 15 18 19 22 23 25 25 27 30 31 33 33 LCS_GDT P 6 P 6 4 6 25 3 4 4 5 6 8 10 13 15 18 19 22 23 25 25 27 30 31 33 33 LCS_GDT W 7 W 7 4 6 25 3 4 4 7 9 10 11 13 15 18 19 22 23 25 25 27 30 31 33 33 LCS_GDT V 8 V 8 3 5 25 3 3 4 5 6 8 10 13 15 18 19 22 23 25 25 27 30 31 33 33 LCS_GDT G 9 G 9 3 9 25 2 3 4 5 6 9 9 10 10 16 18 22 23 25 25 27 30 31 33 33 LCS_GDT S 10 S 10 8 9 25 6 8 8 8 8 9 9 10 11 16 18 22 23 25 25 27 30 31 33 33 LCS_GDT S 11 S 11 8 9 25 6 8 8 8 8 9 9 10 11 15 19 22 23 25 25 27 30 31 33 33 LCS_GDT Y 12 Y 12 8 9 25 6 8 8 8 8 9 9 11 12 16 19 22 23 25 25 27 30 31 33 33 LCS_GDT V 13 V 13 8 9 25 5 8 8 8 8 9 10 13 15 18 19 22 23 25 25 27 30 31 33 33 LCS_GDT A 14 A 14 8 9 25 6 8 8 8 8 9 11 13 15 18 19 22 23 25 25 27 30 31 33 33 LCS_GDT E 15 E 15 8 9 25 6 8 8 8 8 9 11 13 15 18 19 22 23 25 25 27 30 31 33 33 LCS_GDT T 16 T 16 8 9 25 6 8 8 8 8 9 11 13 15 18 19 22 23 25 25 27 30 31 33 33 LCS_GDT G 17 G 17 8 9 25 4 8 8 8 8 9 9 10 12 14 17 19 20 23 24 27 30 31 33 33 LCS_GDT Q 18 Q 18 3 4 25 3 3 4 5 6 8 11 13 15 18 19 22 23 25 25 27 30 31 33 33 LCS_GDT N 19 N 19 3 4 25 3 3 4 4 6 9 11 13 15 18 19 22 23 25 25 27 30 31 33 33 LCS_GDT W 20 W 20 10 10 25 5 9 10 10 10 10 11 13 15 18 19 22 23 25 25 27 30 31 33 33 LCS_GDT A 21 A 21 10 10 25 5 9 10 10 10 10 11 13 15 18 19 22 23 25 25 27 30 31 33 33 LCS_GDT S 22 S 22 10 10 25 8 9 10 10 10 10 11 11 15 18 19 22 23 25 25 27 30 31 33 33 LCS_GDT L 23 L 23 10 10 25 8 9 10 10 10 10 11 13 15 18 19 22 23 25 25 27 30 31 33 33 LCS_GDT A 24 A 24 10 10 25 8 9 10 10 10 10 11 13 13 15 18 21 23 25 25 27 30 31 33 33 LCS_GDT A 25 A 25 10 10 25 8 9 10 10 10 10 11 13 13 15 18 19 23 25 25 27 30 31 33 33 LCS_GDT N 26 N 26 10 10 25 8 9 10 10 10 10 11 13 13 15 18 19 23 25 25 27 30 31 33 33 LCS_GDT E 27 E 27 10 10 22 8 9 10 10 10 10 11 11 13 13 16 19 20 25 25 27 30 31 33 33 LCS_GDT L 28 L 28 10 10 22 8 9 10 10 10 10 11 11 13 13 15 16 18 20 22 25 27 30 31 32 LCS_GDT R 29 R 29 10 10 22 8 9 10 10 10 10 11 13 13 15 18 19 20 22 23 26 28 30 31 32 LCS_GDT V 30 V 30 4 8 22 3 4 5 6 7 9 11 13 13 15 18 19 20 22 24 27 28 31 33 33 LCS_GDT T 31 T 31 4 8 22 3 4 5 6 7 9 11 13 13 15 18 19 20 23 24 27 30 31 33 33 LCS_GDT E 32 E 32 4 8 22 3 4 5 6 7 9 11 13 13 15 18 19 20 23 24 27 30 31 33 33 LCS_GDT R 33 R 33 4 8 22 3 4 5 6 7 9 11 13 13 15 18 20 22 24 25 27 30 31 33 33 LCS_GDT P 34 P 34 3 8 22 2 3 4 5 7 9 11 13 15 18 18 22 22 24 25 27 30 31 33 33 LCS_GDT F 35 F 35 3 8 22 2 4 5 6 7 9 11 13 13 15 18 19 20 23 24 27 29 31 33 33 LCS_GDT W 36 W 36 5 8 22 3 4 5 6 8 9 11 13 13 15 18 19 20 23 24 27 29 30 33 33 LCS_GDT I 37 I 37 5 8 22 3 4 5 6 8 9 10 10 12 15 18 19 20 22 23 26 28 30 31 33 LCS_GDT S 38 S 38 5 8 22 4 4 5 6 8 9 10 10 12 14 18 19 20 21 23 25 27 29 30 32 LCS_GDT S 39 S 39 5 8 22 4 4 5 6 8 9 10 10 12 14 18 19 20 22 24 26 28 30 31 33 LCS_GDT F 40 F 40 5 8 18 4 4 5 6 8 9 10 10 10 11 12 15 17 21 23 25 27 29 31 32 LCS_GDT I 41 I 41 5 8 15 4 4 5 6 8 9 10 10 10 11 12 13 16 20 23 25 27 27 28 31 LCS_GDT G 42 G 42 4 8 15 3 3 4 5 8 9 10 10 10 11 12 13 16 20 23 25 27 27 28 29 LCS_GDT R 43 R 43 4 8 15 0 3 4 5 8 9 10 10 10 11 12 13 14 18 20 22 24 26 28 29 LCS_GDT S 44 S 44 3 6 15 0 3 3 4 6 9 10 10 10 11 11 12 13 17 20 22 23 24 26 29 LCS_GDT K 45 K 45 3 3 14 0 3 3 3 3 4 4 10 10 11 11 11 12 12 12 12 12 14 15 15 LCS_AVERAGE LCS_A: 27.89 ( 13.74 18.13 51.81 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 9 10 10 10 10 11 13 15 18 19 22 23 25 25 27 30 31 33 33 GDT PERCENT_AT 18.18 20.45 22.73 22.73 22.73 22.73 25.00 29.55 34.09 40.91 43.18 50.00 52.27 56.82 56.82 61.36 68.18 70.45 75.00 75.00 GDT RMS_LOCAL 0.31 0.51 0.63 0.63 0.63 0.63 1.68 3.09 3.33 3.66 3.92 4.36 4.66 5.04 5.04 5.37 5.97 6.13 6.51 6.51 GDT RMS_ALL_AT 15.79 15.59 15.27 15.27 15.27 15.27 14.34 16.16 11.76 11.86 11.87 11.77 11.46 11.53 11.53 10.79 10.29 10.18 9.96 9.96 # Checking swapping # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 28.859 0 0.033 0.046 30.215 0.000 0.000 - LGA V 3 V 3 27.653 0 0.312 0.298 31.641 0.000 0.000 26.285 LGA Q 4 Q 4 30.779 0 0.275 1.419 37.755 0.000 0.000 35.096 LGA G 5 G 5 31.899 0 0.105 0.105 32.038 0.000 0.000 - LGA P 6 P 6 30.611 0 0.444 0.457 34.081 0.000 0.000 34.081 LGA W 7 W 7 24.024 0 0.150 1.273 29.390 0.000 0.000 29.019 LGA V 8 V 8 21.787 0 0.610 1.424 25.863 0.000 0.000 22.088 LGA G 9 G 9 18.804 0 0.521 0.521 19.585 0.000 0.000 - LGA S 10 S 10 17.307 0 0.630 0.746 19.663 0.000 0.000 19.663 LGA S 11 S 11 17.751 0 0.042 0.723 21.296 0.000 0.000 21.296 LGA Y 12 Y 12 15.292 0 0.053 1.459 16.063 0.000 0.000 14.760 LGA V 13 V 13 13.504 0 0.042 0.246 14.091 0.000 0.000 13.702 LGA A 14 A 14 15.610 0 0.043 0.046 17.020 0.000 0.000 - LGA E 15 E 15 14.829 0 0.081 0.911 17.171 0.000 0.000 16.392 LGA T 16 T 16 12.892 0 0.139 1.148 13.463 0.000 0.000 12.168 LGA G 17 G 17 11.404 0 0.094 0.094 12.000 0.000 0.000 - LGA Q 18 Q 18 5.775 0 0.681 1.434 8.254 1.364 0.606 8.254 LGA N 19 N 19 2.606 0 0.176 1.342 4.435 23.182 18.182 4.435 LGA W 20 W 20 4.029 0 0.642 1.330 9.823 20.455 6.623 6.920 LGA A 21 A 21 4.863 0 0.084 0.086 7.412 3.182 2.545 - LGA S 22 S 22 7.126 0 0.057 0.627 9.585 0.000 0.000 9.582 LGA L 23 L 23 4.891 0 0.042 0.125 11.012 6.818 3.409 11.012 LGA A 24 A 24 3.870 0 0.000 0.000 5.305 15.000 12.000 - LGA A 25 A 25 4.001 0 0.032 0.040 5.855 22.273 17.818 - LGA N 26 N 26 3.122 0 0.021 0.876 9.634 19.091 9.545 7.474 LGA E 27 E 27 7.611 0 0.045 1.362 11.981 0.000 0.000 11.877 LGA L 28 L 28 8.249 0 0.250 1.386 12.952 0.000 0.000 12.346 LGA R 29 R 29 3.363 0 0.102 1.411 6.687 30.909 13.884 6.687 LGA V 30 V 30 1.322 0 0.637 1.202 4.940 33.182 35.584 2.005 LGA T 31 T 31 2.837 0 0.176 0.228 5.130 24.091 27.013 2.905 LGA E 32 E 32 2.663 0 0.223 1.266 5.455 25.909 24.040 3.193 LGA R 33 R 33 3.111 0 0.133 1.125 14.472 16.364 5.950 14.472 LGA P 34 P 34 2.724 0 0.497 0.473 4.541 31.818 23.117 4.541 LGA F 35 F 35 1.218 0 0.503 1.120 6.644 66.818 35.537 6.438 LGA W 36 W 36 3.646 0 0.662 1.126 12.459 9.545 2.727 12.459 LGA I 37 I 37 8.554 0 0.057 0.644 12.329 0.000 0.000 12.318 LGA S 38 S 38 9.414 0 0.127 0.649 11.198 0.000 0.000 7.817 LGA S 39 S 39 9.468 0 0.103 0.654 13.760 0.000 0.000 7.779 LGA F 40 F 40 15.253 0 0.041 1.268 19.740 0.000 0.000 13.941 LGA I 41 I 41 19.222 0 0.637 0.994 21.240 0.000 0.000 20.104 LGA G 42 G 42 21.099 0 0.673 0.673 21.223 0.000 0.000 - LGA R 43 R 43 22.170 0 0.618 0.981 24.570 0.000 0.000 23.344 LGA S 44 S 44 25.991 0 0.560 0.685 28.791 0.000 0.000 26.165 LGA K 45 K 45 30.703 0 0.673 0.827 34.655 0.000 0.000 33.334 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.122 9.037 10.107 7.955 5.422 2.597 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 13 3.09 33.523 29.473 0.408 LGA_LOCAL RMSD: 3.086 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.157 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.122 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.991192 * X + -0.127476 * Y + -0.035898 * Z + 182.083344 Y_new = 0.101814 * X + -0.560151 * Y + -0.822110 * Z + -109.156700 Z_new = 0.084691 * X + -0.818523 * Y + 0.568196 * Z + -205.892883 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 3.039233 -0.084792 -0.963992 [DEG: 174.1352 -4.8582 -55.2327 ] ZXZ: -0.043637 0.966484 3.038492 [DEG: -2.5002 55.3755 174.0927 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS401_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS401_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 13 3.09 29.473 9.12 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS401_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 REFINED PARENT N/A ATOM 9 N ALA 2 -9.057 26.233 -3.148 1.00 13.10 ATOM 10 CA ALA 2 -10.182 25.350 -3.459 1.00 13.10 ATOM 11 C ALA 2 -11.295 25.426 -2.392 1.00 13.10 ATOM 12 O ALA 2 -11.090 25.928 -1.286 1.00 13.10 ATOM 13 CB ALA 2 -9.653 23.913 -3.614 1.00 13.60 ATOM 14 N VAL 3 -12.460 24.864 -2.727 1.00 11.30 ATOM 15 CA VAL 3 -13.596 24.604 -1.823 1.00 11.30 ATOM 16 C VAL 3 -14.203 23.248 -2.220 1.00 11.30 ATOM 17 O VAL 3 -15.333 23.157 -2.701 1.00 11.30 ATOM 18 CB VAL 3 -14.628 25.762 -1.807 1.00 10.80 ATOM 19 CG1 VAL 3 -15.642 25.577 -0.670 1.00 10.80 ATOM 20 CG2 VAL 3 -13.999 27.147 -1.599 1.00 10.80 ATOM 21 N GLN 4 -13.380 22.194 -2.158 1.00 12.20 ATOM 22 CA GLN 4 -13.757 20.825 -2.533 1.00 12.20 ATOM 23 C GLN 4 -14.458 20.149 -1.342 1.00 12.20 ATOM 24 O GLN 4 -13.834 19.491 -0.505 1.00 12.20 ATOM 25 CB GLN 4 -12.517 20.088 -3.083 1.00 13.20 ATOM 26 CG GLN 4 -12.710 18.597 -3.427 1.00 13.20 ATOM 27 CD GLN 4 -13.823 18.284 -4.433 1.00 13.20 ATOM 28 OE1 GLN 4 -14.374 19.139 -5.115 1.00 13.20 ATOM 29 NE2 GLN 4 -14.202 17.029 -4.571 1.00 13.20 ATOM 30 N GLY 5 -15.774 20.357 -1.259 1.00 12.30 ATOM 31 CA GLY 5 -16.603 20.029 -0.092 1.00 12.30 ATOM 32 C GLY 5 -16.692 21.209 0.892 1.00 12.30 ATOM 33 O GLY 5 -16.321 22.329 0.528 1.00 12.30 ATOM 34 N PRO 6 -17.180 20.997 2.131 1.00 11.30 ATOM 35 CA PRO 6 -17.362 22.048 3.142 1.00 11.30 ATOM 36 C PRO 6 -16.047 22.671 3.665 1.00 11.30 ATOM 37 O PRO 6 -15.570 22.376 4.764 1.00 11.30 ATOM 38 CB PRO 6 -18.237 21.418 4.241 1.00 11.90 ATOM 39 CG PRO 6 -18.970 20.300 3.506 1.00 11.90 ATOM 40 CD PRO 6 -17.886 19.797 2.560 1.00 11.90 ATOM 41 N TRP 7 -15.467 23.563 2.856 1.00 10.00 ATOM 42 CA TRP 7 -14.356 24.471 3.189 1.00 10.00 ATOM 43 C TRP 7 -13.051 23.792 3.639 1.00 10.00 ATOM 44 O TRP 7 -12.319 24.282 4.502 1.00 10.00 ATOM 45 CB TRP 7 -14.876 25.610 4.075 1.00 9.80 ATOM 46 CG TRP 7 -16.184 26.152 3.579 1.00 9.80 ATOM 47 CD1 TRP 7 -16.320 26.939 2.490 1.00 9.80 ATOM 48 CD2 TRP 7 -17.542 25.772 3.971 1.00 9.80 ATOM 49 NE1 TRP 7 -17.651 26.998 2.130 1.00 9.80 ATOM 50 CE2 TRP 7 -18.451 26.304 3.011 1.00 9.80 ATOM 51 CE3 TRP 7 -18.096 25.000 5.015 1.00 9.80 ATOM 52 CZ2 TRP 7 -19.833 26.074 3.069 1.00 9.80 ATOM 53 CZ3 TRP 7 -19.486 24.779 5.097 1.00 9.80 ATOM 54 CH2 TRP 7 -20.353 25.305 4.124 1.00 9.80 ATOM 55 N VAL 8 -12.756 22.671 2.977 1.00 10.70 ATOM 56 CA VAL 8 -11.505 21.890 3.016 1.00 10.70 ATOM 57 C VAL 8 -11.187 21.377 1.592 1.00 10.70 ATOM 58 O VAL 8 -11.817 21.805 0.621 1.00 10.70 ATOM 59 CB VAL 8 -11.603 20.733 4.045 1.00 11.10 ATOM 60 CG1 VAL 8 -11.762 21.228 5.487 1.00 11.10 ATOM 61 CG2 VAL 8 -12.731 19.740 3.733 1.00 11.10 ATOM 62 N GLY 9 -10.231 20.451 1.462 1.00 11.90 ATOM 63 CA GLY 9 -9.951 19.720 0.218 1.00 11.90 ATOM 64 C GLY 9 -8.907 20.391 -0.683 1.00 11.90 ATOM 65 O GLY 9 -8.837 21.616 -0.770 1.00 11.90 ATOM 66 N SER 10 -8.101 19.565 -1.357 1.00 12.70 ATOM 67 CA SER 10 -6.888 19.940 -2.113 1.00 12.70 ATOM 68 C SER 10 -5.754 20.529 -1.250 1.00 12.70 ATOM 69 O SER 10 -5.967 21.098 -0.174 1.00 12.70 ATOM 70 CB SER 10 -7.216 20.790 -3.355 1.00 12.80 ATOM 71 OG SER 10 -8.075 20.061 -4.221 1.00 12.80 ATOM 72 N SER 11 -4.516 20.382 -1.730 1.00 12.50 ATOM 73 CA SER 11 -3.267 20.631 -0.983 1.00 12.50 ATOM 74 C SER 11 -3.166 22.018 -0.339 1.00 12.50 ATOM 75 O SER 11 -2.758 22.137 0.816 1.00 12.50 ATOM 76 CB SER 11 -2.067 20.429 -1.922 1.00 13.00 ATOM 77 OG SER 11 -2.165 19.186 -2.608 1.00 13.00 ATOM 78 N TYR 12 -3.582 23.067 -1.058 1.00 11.50 ATOM 79 CA TYR 12 -3.507 24.455 -0.585 1.00 11.50 ATOM 80 C TYR 12 -4.407 24.706 0.633 1.00 11.50 ATOM 81 O TYR 12 -3.990 25.354 1.588 1.00 11.50 ATOM 82 CB TYR 12 -3.869 25.408 -1.737 1.00 12.60 ATOM 83 CG TYR 12 -2.854 25.420 -2.867 1.00 12.60 ATOM 84 CD1 TYR 12 -3.001 24.564 -3.980 1.00 12.60 ATOM 85 CD2 TYR 12 -1.744 26.283 -2.788 1.00 12.60 ATOM 86 CE1 TYR 12 -2.024 24.556 -4.996 1.00 12.60 ATOM 87 CE2 TYR 12 -0.774 26.283 -3.807 1.00 12.60 ATOM 88 CZ TYR 12 -0.904 25.413 -4.910 1.00 12.60 ATOM 89 OH TYR 12 0.055 25.403 -5.879 1.00 12.60 ATOM 90 N VAL 13 -5.640 24.187 0.627 1.00 9.90 ATOM 91 CA VAL 13 -6.598 24.390 1.734 1.00 9.90 ATOM 92 C VAL 13 -6.243 23.504 2.927 1.00 9.90 ATOM 93 O VAL 13 -6.331 23.952 4.068 1.00 9.90 ATOM 94 CB VAL 13 -8.059 24.142 1.307 1.00 9.80 ATOM 95 CG1 VAL 13 -9.038 24.837 2.264 1.00 9.80 ATOM 96 CG2 VAL 13 -8.365 24.668 -0.098 1.00 9.80 ATOM 97 N ALA 14 -5.768 22.279 2.672 1.00 10.20 ATOM 98 CA ALA 14 -5.271 21.373 3.709 1.00 10.20 ATOM 99 C ALA 14 -4.039 21.943 4.448 1.00 10.20 ATOM 100 O ALA 14 -3.943 21.813 5.671 1.00 10.20 ATOM 101 CB ALA 14 -4.979 20.017 3.055 1.00 10.60 ATOM 102 N GLU 15 -3.132 22.634 3.744 1.00 10.40 ATOM 103 CA GLU 15 -2.045 23.410 4.363 1.00 10.40 ATOM 104 C GLU 15 -2.590 24.628 5.128 1.00 10.40 ATOM 105 O GLU 15 -2.293 24.820 6.310 1.00 10.40 ATOM 106 CB GLU 15 -1.030 23.843 3.285 1.00 11.40 ATOM 107 CG GLU 15 0.060 24.773 3.848 1.00 11.40 ATOM 108 CD GLU 15 1.235 25.010 2.876 1.00 11.40 ATOM 109 OE1 GLU 15 1.047 24.995 1.635 1.00 11.40 ATOM 110 OE2 GLU 15 2.370 25.234 3.364 1.00 11.40 ATOM 111 N THR 16 -3.412 25.449 4.471 1.00 8.80 ATOM 112 CA THR 16 -3.886 26.735 5.018 1.00 8.80 ATOM 113 C THR 16 -4.710 26.549 6.297 1.00 8.80 ATOM 114 O THR 16 -4.541 27.305 7.253 1.00 8.80 ATOM 115 CB THR 16 -4.689 27.506 3.955 1.00 8.90 ATOM 116 OG1 THR 16 -3.861 27.777 2.848 1.00 8.90 ATOM 117 CG2 THR 16 -5.211 28.865 4.414 1.00 8.90 ATOM 118 N GLY 17 -5.549 25.509 6.347 1.00 8.10 ATOM 119 CA GLY 17 -6.496 25.237 7.432 1.00 8.10 ATOM 120 C GLY 17 -5.892 24.758 8.759 1.00 8.10 ATOM 121 O GLY 17 -6.615 24.745 9.758 1.00 8.10 ATOM 122 N GLN 18 -4.600 24.390 8.812 1.00 9.00 ATOM 123 CA GLN 18 -3.934 24.040 10.083 1.00 9.00 ATOM 124 C GLN 18 -2.450 24.458 10.217 1.00 9.00 ATOM 125 O GLN 18 -1.887 24.309 11.303 1.00 9.00 ATOM 126 CB GLN 18 -4.191 22.553 10.431 1.00 9.90 ATOM 127 CG GLN 18 -4.408 22.361 11.948 1.00 9.90 ATOM 128 CD GLN 18 -4.914 20.973 12.353 1.00 9.90 ATOM 129 OE1 GLN 18 -5.364 20.158 11.554 1.00 9.90 ATOM 130 NE2 GLN 18 -4.877 20.651 13.631 1.00 9.90 ATOM 131 N ASN 19 -1.816 25.026 9.176 1.00 8.60 ATOM 132 CA ASN 19 -0.493 25.667 9.283 1.00 8.60 ATOM 133 C ASN 19 -0.610 27.204 9.293 1.00 8.60 ATOM 134 O ASN 19 -0.327 27.837 10.310 1.00 8.60 ATOM 135 CB ASN 19 0.456 25.134 8.194 1.00 9.10 ATOM 136 CG ASN 19 1.886 25.628 8.389 1.00 9.10 ATOM 137 OD1 ASN 19 2.397 25.725 9.498 1.00 9.10 ATOM 138 ND2 ASN 19 2.582 25.974 7.330 1.00 9.10 ATOM 139 N TRP 20 -1.101 27.819 8.206 1.00 7.00 ATOM 140 CA TRP 20 -1.331 29.277 8.161 1.00 7.00 ATOM 141 C TRP 20 -2.423 29.738 9.147 1.00 7.00 ATOM 142 O TRP 20 -2.361 30.849 9.669 1.00 7.00 ATOM 143 CB TRP 20 -1.621 29.726 6.723 1.00 7.20 ATOM 144 CG TRP 20 -1.872 31.195 6.569 1.00 7.20 ATOM 145 CD1 TRP 20 -0.922 32.150 6.438 1.00 7.20 ATOM 146 CD2 TRP 20 -3.149 31.906 6.602 1.00 7.20 ATOM 147 NE1 TRP 20 -1.518 33.397 6.389 1.00 7.20 ATOM 148 CE2 TRP 20 -2.893 33.305 6.470 1.00 7.20 ATOM 149 CE3 TRP 20 -4.498 31.509 6.731 1.00 7.20 ATOM 150 CZ2 TRP 20 -3.924 34.257 6.452 1.00 7.20 ATOM 151 CZ3 TRP 20 -5.537 32.456 6.687 1.00 7.20 ATOM 152 CH2 TRP 20 -5.257 33.825 6.543 1.00 7.20 ATOM 153 N ALA 21 -3.353 28.850 9.518 1.00 7.20 ATOM 154 CA ALA 21 -4.315 29.070 10.603 1.00 7.20 ATOM 155 C ALA 21 -3.666 29.386 11.977 1.00 7.20 ATOM 156 O ALA 21 -4.331 29.945 12.850 1.00 7.20 ATOM 157 CB ALA 21 -5.218 27.834 10.685 1.00 7.50 ATOM 158 N SER 22 -2.372 29.096 12.185 1.00 7.80 ATOM 159 CA SER 22 -1.622 29.562 13.368 1.00 7.80 ATOM 160 C SER 22 -1.245 31.052 13.291 1.00 7.80 ATOM 161 O SER 22 -1.201 31.727 14.320 1.00 7.80 ATOM 162 CB SER 22 -0.356 28.722 13.579 1.00 8.20 ATOM 163 OG SER 22 -0.703 27.367 13.838 1.00 8.20 ATOM 164 N LEU 23 -1.034 31.607 12.090 1.00 7.20 ATOM 165 CA LEU 23 -0.864 33.054 11.893 1.00 7.20 ATOM 166 C LEU 23 -2.194 33.819 12.008 1.00 7.20 ATOM 167 O LEU 23 -2.180 34.965 12.451 1.00 7.20 ATOM 168 CB LEU 23 -0.133 33.351 10.570 1.00 7.70 ATOM 169 CG LEU 23 1.338 32.891 10.539 1.00 7.70 ATOM 170 CD1 LEU 23 1.941 33.171 9.162 1.00 7.70 ATOM 171 CD2 LEU 23 2.203 33.617 11.576 1.00 7.70 ATOM 172 N ALA 24 -3.345 33.183 11.763 1.00 6.60 ATOM 173 CA ALA 24 -4.652 33.778 12.077 1.00 6.60 ATOM 174 C ALA 24 -4.785 34.144 13.575 1.00 6.60 ATOM 175 O ALA 24 -5.317 35.202 13.913 1.00 6.60 ATOM 176 CB ALA 24 -5.761 32.818 11.634 1.00 6.50 ATOM 177 N ALA 25 -4.238 33.317 14.479 1.00 7.50 ATOM 178 CA ALA 25 -4.130 33.642 15.906 1.00 7.50 ATOM 179 C ALA 25 -3.114 34.773 16.182 1.00 7.50 ATOM 180 O ALA 25 -3.371 35.649 17.011 1.00 7.50 ATOM 181 CB ALA 25 -3.777 32.362 16.675 1.00 7.50 ATOM 182 N ASN 26 -1.990 34.813 15.452 1.00 8.30 ATOM 183 CA ASN 26 -1.009 35.905 15.536 1.00 8.30 ATOM 184 C ASN 26 -1.598 37.266 15.096 1.00 8.30 ATOM 185 O ASN 26 -1.289 38.307 15.675 1.00 8.30 ATOM 186 CB ASN 26 0.235 35.538 14.706 1.00 8.50 ATOM 187 CG ASN 26 1.402 36.467 15.007 1.00 8.50 ATOM 188 OD1 ASN 26 1.832 36.595 16.145 1.00 8.50 ATOM 189 ND2 ASN 26 1.948 37.137 14.018 1.00 8.50 ATOM 190 N GLU 27 -2.480 37.252 14.097 1.00 7.90 ATOM 191 CA GLU 27 -3.210 38.418 13.584 1.00 7.90 ATOM 192 C GLU 27 -4.314 38.898 14.546 1.00 7.90 ATOM 193 O GLU 27 -4.568 40.099 14.634 1.00 7.90 ATOM 194 CB GLU 27 -3.783 38.064 12.202 1.00 8.30 ATOM 195 CG GLU 27 -2.671 37.904 11.146 1.00 8.30 ATOM 196 CD GLU 27 -2.977 36.844 10.066 1.00 8.30 ATOM 197 OE1 GLU 27 -4.162 36.642 9.708 1.00 8.30 ATOM 198 OE2 GLU 27 -2.004 36.279 9.508 1.00 8.30 ATOM 199 N LEU 28 -4.927 37.992 15.323 1.00 8.30 ATOM 200 CA LEU 28 -5.879 38.338 16.390 1.00 8.30 ATOM 201 C LEU 28 -5.199 39.068 17.567 1.00 8.30 ATOM 202 O LEU 28 -5.739 40.053 18.076 1.00 8.30 ATOM 203 CB LEU 28 -6.609 37.053 16.834 1.00 8.30 ATOM 204 CG LEU 28 -7.633 37.231 17.975 1.00 8.30 ATOM 205 CD1 LEU 28 -8.765 38.192 17.606 1.00 8.30 ATOM 206 CD2 LEU 28 -8.256 35.878 18.320 1.00 8.30 ATOM 207 N ARG 29 -3.998 38.630 17.981 1.00 9.50 ATOM 208 CA ARG 29 -3.216 39.231 19.089 1.00 9.50 ATOM 209 C ARG 29 -2.409 40.495 18.721 1.00 9.50 ATOM 210 O ARG 29 -1.557 40.918 19.501 1.00 9.50 ATOM 211 CB ARG 29 -2.373 38.150 19.806 1.00 10.50 ATOM 212 CG ARG 29 -1.169 37.660 18.990 1.00 10.50 ATOM 213 CD ARG 29 -0.420 36.516 19.681 1.00 10.50 ATOM 214 NE ARG 29 0.739 36.076 18.876 1.00 10.50 ATOM 215 CZ ARG 29 1.514 35.029 19.092 1.00 10.50 ATOM 216 NH1 ARG 29 2.467 34.757 18.249 1.00 10.50 ATOM 217 NH2 ARG 29 1.364 34.243 20.120 1.00 10.50 ATOM 218 N VAL 30 -2.656 41.109 17.555 1.00 9.90 ATOM 219 CA VAL 30 -1.915 42.301 17.071 1.00 9.90 ATOM 220 C VAL 30 -2.270 43.612 17.811 1.00 9.90 ATOM 221 O VAL 30 -1.522 44.584 17.730 1.00 9.90 ATOM 222 CB VAL 30 -2.043 42.420 15.535 1.00 9.70 ATOM 223 CG1 VAL 30 -3.324 43.128 15.075 1.00 9.70 ATOM 224 CG2 VAL 30 -0.840 43.145 14.917 1.00 9.70 ATOM 225 N THR 31 -3.375 43.642 18.573 1.00 10.40 ATOM 226 CA THR 31 -3.849 44.773 19.419 1.00 10.40 ATOM 227 C THR 31 -4.233 46.066 18.672 1.00 10.40 ATOM 228 O THR 31 -4.289 47.156 19.248 1.00 10.40 ATOM 229 CB THR 31 -2.958 45.031 20.655 1.00 10.40 ATOM 230 OG1 THR 31 -1.722 45.639 20.329 1.00 10.40 ATOM 231 CG2 THR 31 -2.664 43.754 21.447 1.00 10.40 ATOM 232 N GLU 32 -4.571 45.937 17.390 1.00 11.00 ATOM 233 CA GLU 32 -5.176 46.966 16.526 1.00 11.00 ATOM 234 C GLU 32 -6.428 46.367 15.846 1.00 11.00 ATOM 235 O GLU 32 -6.987 45.372 16.326 1.00 11.00 ATOM 236 CB GLU 32 -4.132 47.436 15.486 1.00 11.50 ATOM 237 CG GLU 32 -2.887 48.130 16.063 1.00 11.50 ATOM 238 CD GLU 32 -3.185 49.446 16.815 1.00 11.50 ATOM 239 OE1 GLU 32 -4.249 50.079 16.595 1.00 11.50 ATOM 240 OE2 GLU 32 -2.318 49.894 17.606 1.00 11.50 ATOM 241 N ARG 33 -6.886 46.946 14.725 1.00 10.50 ATOM 242 CA ARG 33 -7.873 46.284 13.850 1.00 10.50 ATOM 243 C ARG 33 -7.240 44.976 13.301 1.00 10.50 ATOM 244 O ARG 33 -6.009 44.882 13.295 1.00 10.50 ATOM 245 CB ARG 33 -8.370 47.264 12.768 1.00 11.00 ATOM 246 CG ARG 33 -9.144 48.433 13.415 1.00 11.00 ATOM 247 CD ARG 33 -9.728 49.426 12.403 1.00 11.00 ATOM 248 NE ARG 33 -8.697 50.312 11.817 1.00 11.00 ATOM 249 CZ ARG 33 -8.350 51.523 12.228 1.00 11.00 ATOM 250 NH1 ARG 33 -7.510 52.239 11.535 1.00 11.00 ATOM 251 NH2 ARG 33 -8.822 52.057 13.320 1.00 11.00 ATOM 252 N PRO 34 -8.010 43.963 12.854 1.00 9.90 ATOM 253 CA PRO 34 -7.510 42.594 12.605 1.00 9.90 ATOM 254 C PRO 34 -6.504 42.356 11.448 1.00 9.90 ATOM 255 O PRO 34 -6.757 41.514 10.604 1.00 9.90 ATOM 256 CB PRO 34 -8.773 41.716 12.483 1.00 10.10 ATOM 257 CG PRO 34 -9.854 42.512 13.203 1.00 10.10 ATOM 258 CD PRO 34 -9.472 43.939 12.831 1.00 10.10 ATOM 259 N PHE 35 -5.360 43.051 11.382 1.00 9.60 ATOM 260 CA PHE 35 -4.211 42.855 10.463 1.00 9.60 ATOM 261 C PHE 35 -4.548 42.854 8.956 1.00 9.60 ATOM 262 O PHE 35 -4.216 43.813 8.255 1.00 9.60 ATOM 263 CB PHE 35 -3.398 41.614 10.882 1.00 10.30 ATOM 264 CG PHE 35 -1.958 41.545 10.375 1.00 10.30 ATOM 265 CD1 PHE 35 -0.905 41.431 11.305 1.00 10.30 ATOM 266 CD2 PHE 35 -1.653 41.543 8.996 1.00 10.30 ATOM 267 CE1 PHE 35 0.431 41.353 10.869 1.00 10.30 ATOM 268 CE2 PHE 35 -0.316 41.478 8.561 1.00 10.30 ATOM 269 CZ PHE 35 0.727 41.386 9.497 1.00 10.30 ATOM 270 N TRP 36 -5.219 41.809 8.450 1.00 8.80 ATOM 271 CA TRP 36 -5.735 41.710 7.080 1.00 8.80 ATOM 272 C TRP 36 -6.704 42.856 6.735 1.00 8.80 ATOM 273 O TRP 36 -6.923 43.134 5.560 1.00 8.80 ATOM 274 CB TRP 36 -6.394 40.331 6.856 1.00 9.40 ATOM 275 CG TRP 36 -7.728 40.066 7.510 1.00 9.40 ATOM 276 CD1 TRP 36 -8.929 40.422 6.994 1.00 9.40 ATOM 277 CD2 TRP 36 -8.035 39.401 8.785 1.00 9.40 ATOM 278 NE1 TRP 36 -9.944 40.068 7.864 1.00 9.40 ATOM 279 CE2 TRP 36 -9.448 39.463 8.998 1.00 9.40 ATOM 280 CE3 TRP 36 -7.274 38.747 9.784 1.00 9.40 ATOM 281 CZ2 TRP 36 -10.064 38.961 10.154 1.00 9.40 ATOM 282 CZ3 TRP 36 -7.881 38.240 10.952 1.00 9.40 ATOM 283 CH2 TRP 36 -9.272 38.353 11.143 1.00 9.40 ATOM 284 N ILE 37 -7.244 43.556 7.743 1.00 8.00 ATOM 285 CA ILE 37 -8.110 44.733 7.590 1.00 8.00 ATOM 286 C ILE 37 -7.368 46.064 7.421 1.00 8.00 ATOM 287 O ILE 37 -7.836 46.901 6.649 1.00 8.00 ATOM 288 CB ILE 37 -9.140 44.747 8.743 1.00 8.10 ATOM 289 CG1 ILE 37 -10.353 43.890 8.331 1.00 8.10 ATOM 290 CG2 ILE 37 -9.582 46.140 9.229 1.00 8.10 ATOM 291 CD1 ILE 37 -11.232 44.442 7.188 1.00 8.10 ATOM 292 N SER 38 -6.230 46.293 8.080 1.00 8.80 ATOM 293 CA SER 38 -5.580 47.619 8.105 1.00 8.80 ATOM 294 C SER 38 -5.191 48.121 6.706 1.00 8.80 ATOM 295 O SER 38 -5.414 49.288 6.380 1.00 8.80 ATOM 296 CB SER 38 -4.343 47.591 9.012 1.00 9.00 ATOM 297 OG SER 38 -4.699 47.133 10.309 1.00 9.00 ATOM 298 N SER 39 -4.698 47.217 5.850 1.00 9.10 ATOM 299 CA SER 39 -4.389 47.472 4.429 1.00 9.10 ATOM 300 C SER 39 -5.534 47.117 3.461 1.00 9.10 ATOM 301 O SER 39 -5.328 47.113 2.251 1.00 9.10 ATOM 302 CB SER 39 -3.081 46.772 4.033 1.00 9.20 ATOM 303 OG SER 39 -2.000 47.230 4.838 1.00 9.20 ATOM 304 N PHE 40 -6.743 46.828 3.958 1.00 8.40 ATOM 305 CA PHE 40 -7.986 46.686 3.170 1.00 8.40 ATOM 306 C PHE 40 -8.873 47.940 3.297 1.00 8.40 ATOM 307 O PHE 40 -9.471 48.397 2.324 1.00 8.40 ATOM 308 CB PHE 40 -8.757 45.442 3.655 1.00 7.80 ATOM 309 CG PHE 40 -8.826 44.308 2.654 1.00 7.80 ATOM 310 CD1 PHE 40 -7.726 43.447 2.487 1.00 7.80 ATOM 311 CD2 PHE 40 -9.995 44.096 1.898 1.00 7.80 ATOM 312 CE1 PHE 40 -7.798 42.375 1.584 1.00 7.80 ATOM 313 CE2 PHE 40 -10.065 43.020 0.991 1.00 7.80 ATOM 314 CZ PHE 40 -8.964 42.162 0.832 1.00 7.80 ATOM 315 N ILE 41 -8.949 48.494 4.512 1.00 9.00 ATOM 316 CA ILE 41 -9.717 49.697 4.877 1.00 9.00 ATOM 317 C ILE 41 -8.943 51.001 4.583 1.00 9.00 ATOM 318 O ILE 41 -9.554 52.065 4.478 1.00 9.00 ATOM 319 CB ILE 41 -10.153 49.547 6.359 1.00 9.20 ATOM 320 CG1 ILE 41 -11.189 48.408 6.538 1.00 9.20 ATOM 321 CG2 ILE 41 -10.686 50.832 7.015 1.00 9.20 ATOM 322 CD1 ILE 41 -12.532 48.576 5.811 1.00 9.20 ATOM 323 N GLY 42 -7.620 50.933 4.396 1.00 10.50 ATOM 324 CA GLY 42 -6.761 52.081 4.070 1.00 10.50 ATOM 325 C GLY 42 -5.698 51.779 3.007 1.00 10.50 ATOM 326 O GLY 42 -5.263 50.636 2.857 1.00 10.50 ATOM 327 N ARG 43 -5.291 52.828 2.273 1.00 11.20 ATOM 328 CA ARG 43 -4.265 52.894 1.198 1.00 11.20 ATOM 329 C ARG 43 -4.502 52.040 -0.058 1.00 11.20 ATOM 330 O ARG 43 -4.261 52.527 -1.160 1.00 11.20 ATOM 331 CB ARG 43 -2.851 52.676 1.778 1.00 11.20 ATOM 332 CG ARG 43 -2.453 53.632 2.920 1.00 11.20 ATOM 333 CD ARG 43 -2.626 55.114 2.558 1.00 11.20 ATOM 334 NE ARG 43 -2.089 56.003 3.605 1.00 11.20 ATOM 335 CZ ARG 43 -2.427 57.265 3.818 1.00 11.20 ATOM 336 NH1 ARG 43 -1.881 57.935 4.794 1.00 11.20 ATOM 337 NH2 ARG 43 -3.301 57.893 3.082 1.00 11.20 ATOM 338 N SER 44 -5.020 50.820 0.061 1.00 12.00 ATOM 339 CA SER 44 -5.368 49.952 -1.078 1.00 12.00 ATOM 340 C SER 44 -6.581 50.482 -1.848 1.00 12.00 ATOM 341 O SER 44 -6.484 50.789 -3.035 1.00 12.00 ATOM 342 CB SER 44 -5.627 48.535 -0.575 1.00 12.10 ATOM 343 OG SER 44 -6.626 48.550 0.427 1.00 12.10 ATOM 344 N LYS 45 -7.711 50.687 -1.157 1.00 13.00 ATOM 345 CA LYS 45 -8.924 51.305 -1.724 1.00 13.00 ATOM 346 C LYS 45 -8.743 52.779 -2.108 1.00 13.00 ATOM 347 O LYS 45 -9.434 53.267 -2.995 1.00 13.00 ATOM 348 CB LYS 45 -10.115 51.091 -0.776 1.00 13.90 ATOM 349 CG LYS 45 -10.013 51.885 0.537 1.00 13.90 ATOM 350 CD LYS 45 -11.201 51.618 1.468 1.00 13.90 ATOM 351 CE LYS 45 -12.533 52.062 0.849 1.00 13.90 ATOM 352 NZ LYS 45 -13.642 51.945 1.833 1.00 13.90 TER END