####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS246_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS246_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 10 - 33 4.97 17.90 LCS_AVERAGE: 45.51 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 14 - 21 1.98 20.66 LCS_AVERAGE: 13.64 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 24 - 29 0.39 24.15 LCS_AVERAGE: 8.16 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 15 4 4 4 5 6 7 8 10 11 12 12 13 15 17 21 24 26 28 29 30 LCS_GDT V 3 V 3 4 6 15 4 4 4 5 6 7 8 10 11 12 12 13 14 17 17 21 26 28 29 30 LCS_GDT Q 4 Q 4 4 6 15 4 4 4 5 6 7 8 10 11 12 12 13 15 17 20 24 26 28 29 30 LCS_GDT G 5 G 5 4 6 15 4 4 4 5 6 7 8 10 11 12 12 13 15 17 18 22 26 28 29 30 LCS_GDT P 6 P 6 4 6 15 3 4 4 5 6 7 8 10 11 12 12 13 15 17 20 24 26 28 29 30 LCS_GDT W 7 W 7 4 6 15 3 4 4 5 6 7 8 10 11 12 12 13 15 19 21 24 26 28 29 30 LCS_GDT V 8 V 8 4 5 15 3 4 4 5 6 7 8 10 11 12 12 13 14 17 18 23 26 28 29 30 LCS_GDT G 9 G 9 4 5 16 3 4 4 5 6 7 8 10 11 12 12 13 15 17 20 24 26 28 29 30 LCS_GDT S 10 S 10 3 5 24 3 3 4 5 6 7 8 10 11 12 12 18 20 22 23 24 26 28 29 30 LCS_GDT S 11 S 11 3 4 24 3 3 3 5 5 7 8 10 11 13 17 18 21 22 23 24 26 28 29 30 LCS_GDT Y 12 Y 12 3 3 24 3 3 3 4 4 4 8 10 11 12 14 17 20 22 22 24 26 28 29 30 LCS_GDT V 13 V 13 3 3 24 3 3 3 3 3 4 6 9 11 13 17 18 21 22 23 24 26 28 29 30 LCS_GDT A 14 A 14 3 8 24 1 4 7 7 9 11 12 14 16 17 18 19 21 22 23 24 26 28 29 30 LCS_GDT E 15 E 15 3 8 24 3 4 6 7 9 11 12 14 16 17 18 19 21 22 23 24 26 28 29 30 LCS_GDT T 16 T 16 3 8 24 3 4 7 7 9 11 12 14 16 17 18 19 21 22 23 24 26 28 29 30 LCS_GDT G 17 G 17 3 8 24 3 4 4 4 6 8 12 12 13 17 18 19 21 22 23 24 26 28 29 30 LCS_GDT Q 18 Q 18 3 8 24 3 4 7 7 9 11 12 14 16 17 18 19 21 22 23 24 26 28 29 30 LCS_GDT N 19 N 19 3 8 24 3 4 7 7 9 11 12 14 16 17 18 19 21 22 23 24 26 28 29 30 LCS_GDT W 20 W 20 3 8 24 3 4 4 6 8 11 12 14 16 17 18 19 21 22 23 24 26 28 29 30 LCS_GDT A 21 A 21 3 8 24 3 3 4 6 8 11 12 13 16 17 18 19 21 22 23 24 26 28 29 30 LCS_GDT S 22 S 22 3 6 24 3 3 4 6 8 11 12 14 16 17 18 19 21 22 23 24 26 28 29 30 LCS_GDT L 23 L 23 3 7 24 3 3 4 6 7 11 12 14 16 17 18 19 21 22 23 24 26 28 29 30 LCS_GDT A 24 A 24 6 7 24 5 6 7 7 9 11 12 14 16 17 18 19 21 22 23 24 26 28 29 30 LCS_GDT A 25 A 25 6 7 24 5 6 7 7 7 10 11 14 16 17 18 19 21 22 23 24 26 27 29 30 LCS_GDT N 26 N 26 6 7 24 5 6 7 7 7 7 12 14 16 17 18 19 21 22 23 24 26 28 29 30 LCS_GDT E 27 E 27 6 7 24 5 6 7 7 7 11 12 12 13 15 18 19 21 22 23 24 26 28 29 30 LCS_GDT L 28 L 28 6 7 24 5 6 7 7 7 8 8 11 13 17 18 19 21 21 23 24 25 25 27 29 LCS_GDT R 29 R 29 6 7 24 5 6 7 7 9 10 12 14 16 17 18 19 21 22 23 24 26 28 29 30 LCS_GDT V 30 V 30 3 4 24 4 4 4 7 9 10 12 14 16 17 18 19 21 22 23 24 26 28 29 30 LCS_GDT T 31 T 31 3 4 24 4 4 4 5 6 10 12 14 16 17 18 19 21 22 23 24 26 28 29 30 LCS_GDT E 32 E 32 4 6 24 3 4 7 7 9 10 12 14 16 17 18 19 21 22 23 24 26 27 28 30 LCS_GDT R 33 R 33 4 6 24 0 3 4 6 6 6 7 7 11 14 15 17 19 21 23 24 25 26 28 29 LCS_GDT P 34 P 34 4 6 22 3 3 4 6 6 6 7 7 9 12 15 16 18 21 22 24 25 26 27 28 LCS_GDT F 35 F 35 4 6 22 3 3 4 6 6 6 7 7 8 12 13 16 18 19 22 23 25 25 26 26 LCS_GDT W 36 W 36 4 6 14 3 3 4 6 6 6 7 7 9 12 13 13 13 14 16 17 19 21 24 24 LCS_GDT I 37 I 37 4 6 14 0 3 4 6 6 6 7 7 9 12 13 13 13 14 14 14 14 15 15 16 LCS_GDT S 38 S 38 0 6 14 0 0 3 5 5 6 7 8 9 12 13 13 13 14 14 14 14 14 15 16 LCS_GDT S 39 S 39 3 4 14 0 3 3 6 6 6 6 8 9 12 13 13 13 14 14 14 14 14 14 15 LCS_GDT F 40 F 40 3 5 14 3 3 3 3 5 5 6 8 9 12 13 13 13 14 14 14 14 14 14 15 LCS_GDT I 41 I 41 3 5 14 3 3 3 6 6 6 6 8 9 12 13 13 13 14 14 14 14 14 14 15 LCS_GDT G 42 G 42 3 5 14 3 3 4 6 6 6 6 8 9 12 13 13 13 14 14 14 14 14 14 15 LCS_GDT R 43 R 43 3 5 14 0 3 4 6 6 6 6 8 9 12 13 13 13 14 14 14 14 14 14 15 LCS_GDT S 44 S 44 3 5 14 1 3 4 6 6 6 6 8 9 12 13 13 13 14 14 14 14 14 14 15 LCS_GDT K 45 K 45 0 5 14 0 0 4 6 6 6 6 8 9 12 13 13 13 14 14 14 14 14 14 15 LCS_AVERAGE LCS_A: 22.43 ( 8.16 13.64 45.51 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 6 7 7 9 11 12 14 16 17 18 19 21 22 23 24 26 28 29 30 GDT PERCENT_AT 11.36 13.64 15.91 15.91 20.45 25.00 27.27 31.82 36.36 38.64 40.91 43.18 47.73 50.00 52.27 54.55 59.09 63.64 65.91 68.18 GDT RMS_LOCAL 0.18 0.39 0.99 0.99 1.55 2.20 2.34 2.76 3.05 3.25 3.47 3.67 4.14 4.53 4.73 5.07 5.88 6.57 6.63 6.71 GDT RMS_ALL_AT 24.30 24.15 23.89 23.89 17.81 19.81 19.96 17.97 18.10 18.05 17.83 17.85 17.86 18.15 17.77 17.72 18.99 20.17 20.01 19.76 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 11.526 0 0.046 0.077 12.460 0.000 0.000 - LGA V 3 V 3 15.047 0 0.082 0.080 18.326 0.000 0.000 18.326 LGA Q 4 Q 4 13.677 0 0.082 1.175 16.095 0.000 0.000 10.782 LGA G 5 G 5 16.186 0 0.202 0.202 16.186 0.000 0.000 - LGA P 6 P 6 14.815 0 0.727 0.633 15.225 0.000 0.000 15.104 LGA W 7 W 7 12.234 0 0.342 1.294 14.429 0.000 0.130 7.693 LGA V 8 V 8 15.362 0 0.671 1.497 20.282 0.000 0.000 20.282 LGA G 9 G 9 13.770 0 0.404 0.404 14.193 0.000 0.000 - LGA S 10 S 10 8.923 0 0.678 0.726 9.999 0.000 0.000 5.877 LGA S 11 S 11 7.454 0 0.603 0.777 7.838 0.000 0.000 5.332 LGA Y 12 Y 12 9.444 0 0.652 0.951 13.053 0.000 0.000 13.053 LGA V 13 V 13 7.298 0 0.598 0.619 10.219 0.000 0.000 9.323 LGA A 14 A 14 1.817 0 0.627 0.604 3.718 30.909 30.182 - LGA E 15 E 15 2.685 0 0.650 1.321 10.220 32.727 15.758 9.687 LGA T 16 T 16 1.204 0 0.704 1.373 4.094 37.273 34.805 4.094 LGA G 17 G 17 5.282 0 0.203 0.203 5.282 6.364 6.364 - LGA Q 18 Q 18 0.959 0 0.138 0.990 7.174 50.909 24.040 6.460 LGA N 19 N 19 2.229 0 0.688 1.326 7.031 49.091 28.409 3.979 LGA W 20 W 20 4.851 0 0.072 1.144 10.841 5.000 1.429 10.841 LGA A 21 A 21 5.154 0 0.634 0.585 7.174 0.455 0.364 - LGA S 22 S 22 4.208 0 0.626 0.601 5.168 6.818 4.545 5.145 LGA L 23 L 23 3.923 0 0.080 0.081 7.890 17.273 8.636 7.890 LGA A 24 A 24 1.738 0 0.599 0.580 3.552 37.727 43.273 - LGA A 25 A 25 3.949 0 0.052 0.060 6.481 35.000 28.000 - LGA N 26 N 26 3.791 0 0.042 1.004 9.778 16.364 8.182 8.556 LGA E 27 E 27 6.948 0 0.089 1.290 12.867 0.455 0.202 12.867 LGA L 28 L 28 6.731 0 0.302 0.327 11.120 0.000 0.000 10.387 LGA R 29 R 29 1.450 0 0.452 1.677 6.265 45.455 34.050 6.265 LGA V 30 V 30 2.591 0 0.040 0.108 5.870 31.818 18.442 5.654 LGA T 31 T 31 3.028 0 0.388 1.068 6.611 33.182 19.221 5.700 LGA E 32 E 32 2.151 0 0.628 1.499 8.670 31.364 14.141 8.670 LGA R 33 R 33 8.403 0 0.625 1.560 12.235 0.000 0.000 12.235 LGA P 34 P 34 11.271 0 0.173 0.346 12.791 0.000 0.000 12.791 LGA F 35 F 35 11.787 0 0.111 1.228 16.923 0.000 0.000 16.923 LGA W 36 W 36 18.159 0 0.119 1.128 20.005 0.000 0.000 20.005 LGA I 37 I 37 24.079 0 0.633 0.624 26.985 0.000 0.000 26.856 LGA S 38 S 38 28.566 0 0.636 0.835 29.299 0.000 0.000 27.323 LGA S 39 S 39 28.806 0 0.678 0.564 30.517 0.000 0.000 28.294 LGA F 40 F 40 34.274 0 0.650 0.953 36.048 0.000 0.000 32.554 LGA I 41 I 41 40.038 0 0.055 1.098 45.200 0.000 0.000 45.200 LGA G 42 G 42 41.891 0 0.725 0.725 41.891 0.000 0.000 - LGA R 43 R 43 39.096 0 0.484 1.158 40.401 0.000 0.000 32.135 LGA S 44 S 44 39.833 0 0.659 0.818 44.085 0.000 0.000 44.085 LGA K 45 K 45 38.853 0 0.048 0.543 42.797 0.000 0.000 42.797 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 16.623 16.471 16.666 10.640 7.277 0.468 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 14 2.76 28.977 25.987 0.490 LGA_LOCAL RMSD: 2.759 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 17.970 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 16.623 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.928462 * X + -0.208610 * Y + 0.307312 * Z + 20.537231 Y_new = 0.357736 * X + -0.724815 * Y + 0.588785 * Z + 51.926983 Z_new = 0.099918 * X + 0.656601 * Y + 0.747590 * Z + -38.978436 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.773823 -0.100085 0.720691 [DEG: 158.9283 -5.7345 41.2925 ] ZXZ: 2.660545 0.726370 0.151016 [DEG: 152.4380 41.6179 8.6526 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS246_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS246_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 14 2.76 25.987 16.62 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS246_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT 1srpA 1go7P ATOM 9 N ALA 2 17.992 29.585 7.688 1.00 14.19 ATOM 10 CA ALA 2 18.056 30.635 6.723 1.00 14.19 ATOM 11 CB ALA 2 18.075 32.042 7.344 1.00 14.19 ATOM 12 C ALA 2 19.324 30.460 5.962 1.00 14.19 ATOM 13 O ALA 2 20.342 30.028 6.504 1.00 14.19 ATOM 14 N VAL 3 19.276 30.774 4.657 1.00 14.41 ATOM 15 CA VAL 3 20.448 30.679 3.846 1.00 14.41 ATOM 16 CB VAL 3 20.228 29.943 2.557 1.00 14.41 ATOM 17 CG1 VAL 3 21.523 29.994 1.731 1.00 14.41 ATOM 18 CG2 VAL 3 19.760 28.516 2.891 1.00 14.41 ATOM 19 C VAL 3 20.813 32.081 3.508 1.00 14.41 ATOM 20 O VAL 3 19.946 32.912 3.246 1.00 14.41 ATOM 21 N GLN 4 22.121 32.386 3.527 1.00 13.00 ATOM 22 CA GLN 4 22.534 33.722 3.236 1.00 13.00 ATOM 23 CB GLN 4 23.361 34.364 4.362 1.00 13.00 ATOM 24 CG GLN 4 24.691 33.659 4.623 1.00 13.00 ATOM 25 CD GLN 4 25.320 34.289 5.858 1.00 13.00 ATOM 26 OE1 GLN 4 24.705 35.112 6.536 1.00 13.00 ATOM 27 NE2 GLN 4 26.581 33.884 6.166 1.00 13.00 ATOM 28 C GLN 4 23.365 33.674 2.002 1.00 13.00 ATOM 29 O GLN 4 23.800 32.606 1.571 1.00 13.00 ATOM 30 N GLY 5 23.580 34.847 1.380 1.00 13.21 ATOM 31 CA GLY 5 24.334 34.885 0.167 1.00 13.21 ATOM 32 C GLY 5 23.394 35.398 -0.865 1.00 13.21 ATOM 33 O GLY 5 22.649 36.349 -0.631 1.00 13.21 ATOM 34 N PRO 6 23.419 34.791 -2.012 1.00 13.89 ATOM 35 CA PRO 6 22.492 35.189 -3.029 1.00 13.89 ATOM 36 CD PRO 6 24.668 34.299 -2.572 1.00 13.89 ATOM 37 CB PRO 6 22.998 34.553 -4.322 1.00 13.89 ATOM 38 CG PRO 6 24.518 34.444 -4.097 1.00 13.89 ATOM 39 C PRO 6 21.142 34.728 -2.597 1.00 13.89 ATOM 40 O PRO 6 21.062 33.797 -1.798 1.00 13.89 ATOM 41 N TRP 7 20.069 35.373 -3.089 1.00 14.22 ATOM 42 CA TRP 7 18.758 34.974 -2.676 1.00 14.22 ATOM 43 CB TRP 7 17.756 36.137 -2.597 1.00 14.22 ATOM 44 CG TRP 7 16.364 35.725 -2.177 1.00 14.22 ATOM 45 CD2 TRP 7 15.179 36.451 -2.535 1.00 14.22 ATOM 46 CD1 TRP 7 15.950 34.644 -1.457 1.00 14.22 ATOM 47 NE1 TRP 7 14.580 34.652 -1.340 1.00 14.22 ATOM 48 CE2 TRP 7 14.093 35.760 -2.001 1.00 14.22 ATOM 49 CE3 TRP 7 15.011 37.599 -3.255 1.00 14.22 ATOM 50 CZ2 TRP 7 12.817 36.208 -2.181 1.00 14.22 ATOM 51 CZ3 TRP 7 13.723 38.052 -3.430 1.00 14.22 ATOM 52 CH2 TRP 7 12.647 37.370 -2.902 1.00 14.22 ATOM 53 C TRP 7 18.222 34.026 -3.692 1.00 14.22 ATOM 54 O TRP 7 18.233 34.304 -4.890 1.00 14.22 ATOM 55 N VAL 8 17.754 32.854 -3.225 1.00 13.19 ATOM 56 CA VAL 8 17.170 31.908 -4.123 1.00 13.19 ATOM 57 CB VAL 8 18.098 30.799 -4.520 1.00 13.19 ATOM 58 CG1 VAL 8 19.279 31.404 -5.299 1.00 13.19 ATOM 59 CG2 VAL 8 18.508 30.025 -3.255 1.00 13.19 ATOM 60 C VAL 8 16.029 31.281 -3.398 1.00 13.19 ATOM 61 O VAL 8 16.070 31.107 -2.182 1.00 13.19 ATOM 62 N GLY 9 14.959 30.943 -4.138 1.00 13.34 ATOM 63 CA GLY 9 13.839 30.297 -3.525 1.00 13.34 ATOM 64 C GLY 9 13.257 31.239 -2.528 1.00 13.34 ATOM 65 O GLY 9 13.286 32.457 -2.705 1.00 13.34 ATOM 66 N SER 10 12.707 30.676 -1.436 1.00 13.26 ATOM 67 CA SER 10 12.116 31.479 -0.410 1.00 13.26 ATOM 68 CB SER 10 10.601 31.265 -0.259 1.00 13.26 ATOM 69 OG SER 10 9.933 31.653 -1.452 1.00 13.26 ATOM 70 C SER 10 12.749 31.066 0.876 1.00 13.26 ATOM 71 O SER 10 13.283 29.963 0.993 1.00 13.26 ATOM 72 N SER 11 12.719 31.964 1.879 1.00 13.26 ATOM 73 CA SER 11 13.318 31.673 3.147 1.00 13.26 ATOM 74 CB SER 11 13.561 32.923 4.010 1.00 13.26 ATOM 75 OG SER 11 12.322 33.529 4.346 1.00 13.26 ATOM 76 C SER 11 12.395 30.776 3.897 1.00 13.26 ATOM 77 O SER 11 11.227 30.628 3.543 1.00 13.26 ATOM 78 N TYR 12 12.913 30.131 4.959 1.00 13.16 ATOM 79 CA TYR 12 12.077 29.249 5.711 1.00 13.16 ATOM 80 CB TYR 12 12.712 27.870 5.951 1.00 13.16 ATOM 81 CG TYR 12 11.657 26.996 6.530 1.00 13.16 ATOM 82 CD1 TYR 12 10.827 26.279 5.699 1.00 13.16 ATOM 83 CD2 TYR 12 11.492 26.896 7.892 1.00 13.16 ATOM 84 CE1 TYR 12 9.847 25.468 6.218 1.00 13.16 ATOM 85 CE2 TYR 12 10.512 26.087 8.416 1.00 13.16 ATOM 86 CZ TYR 12 9.693 25.368 7.578 1.00 13.16 ATOM 87 OH TYR 12 8.689 24.535 8.117 1.00 13.16 ATOM 88 C TYR 12 11.897 29.891 7.045 1.00 13.16 ATOM 89 O TYR 12 12.867 30.225 7.723 1.00 13.16 ATOM 90 N VAL 13 10.628 30.099 7.450 1.00 12.86 ATOM 91 CA VAL 13 10.389 30.744 8.704 1.00 12.86 ATOM 92 CB VAL 13 10.023 32.193 8.544 1.00 12.86 ATOM 93 CG1 VAL 13 9.778 32.815 9.927 1.00 12.86 ATOM 94 CG2 VAL 13 11.135 32.884 7.740 1.00 12.86 ATOM 95 C VAL 13 9.229 30.039 9.336 1.00 12.86 ATOM 96 O VAL 13 8.474 29.342 8.661 1.00 12.86 ATOM 97 N ALA 14 9.075 30.185 10.668 1.00 12.32 ATOM 98 CA ALA 14 7.977 29.547 11.327 1.00 12.32 ATOM 99 CB ALA 14 8.379 28.786 12.602 1.00 12.32 ATOM 100 C ALA 14 7.023 30.620 11.727 1.00 12.32 ATOM 101 O ALA 14 7.424 31.705 12.145 1.00 12.32 ATOM 102 N GLU 15 5.715 30.349 11.582 1.00 11.74 ATOM 103 CA GLU 15 4.753 31.338 11.958 1.00 11.74 ATOM 104 CB GLU 15 3.842 31.797 10.806 1.00 11.74 ATOM 105 CG GLU 15 3.002 30.664 10.214 1.00 11.74 ATOM 106 CD GLU 15 2.145 31.233 9.093 1.00 11.74 ATOM 107 OE1 GLU 15 2.045 32.486 8.993 1.00 11.74 ATOM 108 OE2 GLU 15 1.572 30.415 8.325 1.00 11.74 ATOM 109 C GLU 15 3.877 30.720 12.990 1.00 11.74 ATOM 110 O GLU 15 3.606 29.520 12.959 1.00 11.74 ATOM 111 N THR 16 3.416 31.541 13.951 1.00 11.10 ATOM 112 CA THR 16 2.573 31.027 14.982 1.00 11.10 ATOM 113 CB THR 16 2.588 31.835 16.243 1.00 11.10 ATOM 114 OG1 THR 16 1.905 31.140 17.276 1.00 11.10 ATOM 115 CG2 THR 16 1.905 33.183 15.967 1.00 11.10 ATOM 116 C THR 16 1.179 31.032 14.463 1.00 11.10 ATOM 117 O THR 16 0.927 31.434 13.328 1.00 11.10 ATOM 118 N GLY 17 0.227 30.560 15.288 1.00 11.04 ATOM 119 CA GLY 17 -1.111 30.506 14.795 1.00 11.04 ATOM 120 C GLY 17 -1.026 29.538 13.674 1.00 11.04 ATOM 121 O GLY 17 -1.683 29.698 12.648 1.00 11.04 ATOM 122 N GLN 18 -0.182 28.505 13.864 1.00 11.89 ATOM 123 CA GLN 18 0.076 27.548 12.836 1.00 11.89 ATOM 124 CB GLN 18 1.075 26.461 13.269 1.00 11.89 ATOM 125 CG GLN 18 2.462 27.002 13.622 1.00 11.89 ATOM 126 CD GLN 18 3.285 25.849 14.181 1.00 11.89 ATOM 127 OE1 GLN 18 2.736 24.860 14.663 1.00 11.89 ATOM 128 NE2 GLN 18 4.638 25.981 14.125 1.00 11.89 ATOM 129 C GLN 18 -1.199 26.861 12.504 1.00 11.89 ATOM 130 O GLN 18 -1.691 26.020 13.255 1.00 11.89 ATOM 131 N ASN 19 -1.774 27.232 11.348 1.00 11.83 ATOM 132 CA ASN 19 -2.954 26.600 10.856 1.00 11.83 ATOM 133 CB ASN 19 -4.255 27.178 11.442 1.00 11.83 ATOM 134 CG ASN 19 -5.410 26.227 11.141 1.00 11.83 ATOM 135 OD1 ASN 19 -5.611 25.800 10.005 1.00 11.83 ATOM 136 ND2 ASN 19 -6.198 25.883 12.196 1.00 11.83 ATOM 137 C ASN 19 -2.950 26.905 9.401 1.00 11.83 ATOM 138 O ASN 19 -2.494 27.975 8.997 1.00 11.83 ATOM 139 N TRP 20 -3.435 25.979 8.558 1.00 11.44 ATOM 140 CA TRP 20 -3.432 26.348 7.181 1.00 11.44 ATOM 141 CB TRP 20 -3.710 25.178 6.221 1.00 11.44 ATOM 142 CG TRP 20 -3.497 25.543 4.774 1.00 11.44 ATOM 143 CD2 TRP 20 -2.204 25.558 4.150 1.00 11.44 ATOM 144 CD1 TRP 20 -4.393 25.930 3.822 1.00 11.44 ATOM 145 NE1 TRP 20 -3.738 26.182 2.638 1.00 11.44 ATOM 146 CE2 TRP 20 -2.390 25.958 2.827 1.00 11.44 ATOM 147 CE3 TRP 20 -0.962 25.265 4.642 1.00 11.44 ATOM 148 CZ2 TRP 20 -1.331 26.070 1.971 1.00 11.44 ATOM 149 CZ3 TRP 20 0.103 25.378 3.775 1.00 11.44 ATOM 150 CH2 TRP 20 -0.079 25.772 2.465 1.00 11.44 ATOM 151 C TRP 20 -4.533 27.345 7.068 1.00 11.44 ATOM 152 O TRP 20 -5.708 27.012 7.211 1.00 11.44 ATOM 153 N ALA 21 -4.154 28.605 6.786 1.00 10.95 ATOM 154 CA ALA 21 -5.063 29.711 6.754 1.00 10.95 ATOM 155 CB ALA 21 -6.260 29.509 5.808 1.00 10.95 ATOM 156 C ALA 21 -5.586 29.895 8.142 1.00 10.95 ATOM 157 O ALA 21 -6.135 28.977 8.750 1.00 10.95 ATOM 158 N SER 22 -5.411 31.113 8.687 1.00 9.71 ATOM 159 CA SER 22 -5.884 31.399 10.007 1.00 9.71 ATOM 160 CB SER 22 -5.399 30.392 11.064 1.00 9.71 ATOM 161 OG SER 22 -3.981 30.419 11.149 1.00 9.71 ATOM 162 C SER 22 -5.344 32.742 10.370 1.00 9.71 ATOM 163 O SER 22 -4.367 33.206 9.786 1.00 9.71 ATOM 164 N LEU 23 -5.987 33.418 11.338 1.00 8.93 ATOM 165 CA LEU 23 -5.508 34.709 11.725 1.00 8.93 ATOM 166 CB LEU 23 -6.443 35.411 12.722 1.00 8.93 ATOM 167 CG LEU 23 -7.817 35.751 12.114 1.00 8.93 ATOM 168 CD1 LEU 23 -8.728 36.469 13.124 1.00 8.93 ATOM 169 CD2 LEU 23 -7.664 36.520 10.792 1.00 8.93 ATOM 170 C LEU 23 -4.181 34.540 12.375 1.00 8.93 ATOM 171 O LEU 23 -3.244 35.280 12.077 1.00 8.93 ATOM 172 N ALA 24 -4.092 33.551 13.286 1.00 8.39 ATOM 173 CA ALA 24 -2.894 33.211 13.995 1.00 8.39 ATOM 174 CB ALA 24 -1.574 33.461 13.238 1.00 8.39 ATOM 175 C ALA 24 -2.855 33.952 15.290 1.00 8.39 ATOM 176 O ALA 24 -3.650 34.856 15.544 1.00 8.39 ATOM 177 N ALA 25 -1.904 33.544 16.148 1.00 8.19 ATOM 178 CA ALA 25 -1.693 34.109 17.445 1.00 8.19 ATOM 179 CB ALA 25 -0.586 33.391 18.236 1.00 8.19 ATOM 180 C ALA 25 -1.284 35.535 17.293 1.00 8.19 ATOM 181 O ALA 25 -1.673 36.383 18.091 1.00 8.19 ATOM 182 N ASN 26 -0.511 35.844 16.239 1.00 8.38 ATOM 183 CA ASN 26 0.054 37.153 16.087 1.00 8.38 ATOM 184 CB ASN 26 0.800 37.307 14.752 1.00 8.38 ATOM 185 CG ASN 26 1.988 36.355 14.786 1.00 8.38 ATOM 186 OD1 ASN 26 2.096 35.446 13.965 1.00 8.38 ATOM 187 ND2 ASN 26 2.904 36.566 15.768 1.00 8.38 ATOM 188 C ASN 26 -1.027 38.182 16.121 1.00 8.38 ATOM 189 O ASN 26 -0.894 39.204 16.793 1.00 8.38 ATOM 190 N GLU 27 -2.144 37.944 15.416 1.00 8.39 ATOM 191 CA GLU 27 -3.165 38.946 15.427 1.00 8.39 ATOM 192 CB GLU 27 -4.378 38.600 14.546 1.00 8.39 ATOM 193 CG GLU 27 -5.444 39.698 14.546 1.00 8.39 ATOM 194 CD GLU 27 -6.584 39.265 13.636 1.00 8.39 ATOM 195 OE1 GLU 27 -6.520 38.125 13.107 1.00 8.39 ATOM 196 OE2 GLU 27 -7.534 40.071 13.455 1.00 8.39 ATOM 197 C GLU 27 -3.639 39.090 16.834 1.00 8.39 ATOM 198 O GLU 27 -3.908 40.194 17.304 1.00 8.39 ATOM 199 N LEU 28 -3.755 37.960 17.547 1.00 8.54 ATOM 200 CA LEU 28 -4.255 38.003 18.885 1.00 8.54 ATOM 201 CB LEU 28 -4.343 36.598 19.509 1.00 8.54 ATOM 202 CG LEU 28 -5.119 35.570 18.663 1.00 8.54 ATOM 203 CD1 LEU 28 -5.323 34.259 19.438 1.00 8.54 ATOM 204 CD2 LEU 28 -6.422 36.154 18.103 1.00 8.54 ATOM 205 C LEU 28 -3.310 38.774 19.753 1.00 8.54 ATOM 206 O LEU 28 -3.703 39.721 20.432 1.00 8.54 ATOM 207 N ARG 29 -2.014 38.408 19.706 1.00 9.05 ATOM 208 CA ARG 29 -1.066 38.980 20.616 1.00 9.05 ATOM 209 CB ARG 29 0.373 38.539 20.316 1.00 9.05 ATOM 210 CG ARG 29 0.636 37.041 20.428 1.00 9.05 ATOM 211 CD ARG 29 2.040 36.683 19.940 1.00 9.05 ATOM 212 NE ARG 29 2.273 35.239 20.203 1.00 9.05 ATOM 213 CZ ARG 29 3.556 34.786 20.274 1.00 9.05 ATOM 214 NH1 ARG 29 4.595 35.652 20.102 1.00 9.05 ATOM 215 NH2 ARG 29 3.802 33.471 20.531 1.00 9.05 ATOM 216 C ARG 29 -1.045 40.450 20.429 1.00 9.05 ATOM 217 O ARG 29 -1.344 41.215 21.346 1.00 9.05 ATOM 218 N VAL 30 -0.710 40.885 19.205 1.00 9.06 ATOM 219 CA VAL 30 -0.644 42.294 19.000 1.00 9.06 ATOM 220 CB VAL 30 0.738 42.853 19.143 1.00 9.06 ATOM 221 CG1 VAL 30 0.702 44.344 18.770 1.00 9.06 ATOM 222 CG2 VAL 30 1.231 42.580 20.573 1.00 9.06 ATOM 223 C VAL 30 -1.059 42.565 17.605 1.00 9.06 ATOM 224 O VAL 30 -0.333 42.276 16.657 1.00 9.06 ATOM 225 N THR 31 -2.257 43.144 17.466 1.00 9.12 ATOM 226 CA THR 31 -2.827 43.516 16.213 1.00 9.12 ATOM 227 CB THR 31 -3.278 42.362 15.363 1.00 9.12 ATOM 228 OG1 THR 31 -2.182 41.522 15.037 1.00 9.12 ATOM 229 CG2 THR 31 -3.908 42.927 14.079 1.00 9.12 ATOM 230 C THR 31 -4.053 44.239 16.620 1.00 9.12 ATOM 231 O THR 31 -4.105 45.466 16.687 1.00 9.12 ATOM 232 N GLU 32 -5.074 43.426 16.927 1.00 9.18 ATOM 233 CA GLU 32 -6.349 43.878 17.373 1.00 9.18 ATOM 234 CB GLU 32 -7.339 42.716 17.590 1.00 9.18 ATOM 235 CG GLU 32 -8.792 43.145 17.816 1.00 9.18 ATOM 236 CD GLU 32 -9.017 43.374 19.305 1.00 9.18 ATOM 237 OE1 GLU 32 -8.049 43.201 20.092 1.00 9.18 ATOM 238 OE2 GLU 32 -10.172 43.718 19.676 1.00 9.18 ATOM 239 C GLU 32 -6.147 44.579 18.675 1.00 9.18 ATOM 240 O GLU 32 -6.875 45.512 19.005 1.00 9.18 ATOM 241 N ARG 33 -5.141 44.150 19.458 1.00 9.14 ATOM 242 CA ARG 33 -4.969 44.753 20.746 1.00 9.14 ATOM 243 CB ARG 33 -3.801 44.167 21.553 1.00 9.14 ATOM 244 CG ARG 33 -4.102 42.760 22.067 1.00 9.14 ATOM 245 CD ARG 33 -3.157 42.290 23.172 1.00 9.14 ATOM 246 NE ARG 33 -3.284 43.254 24.301 1.00 9.14 ATOM 247 CZ ARG 33 -3.527 42.798 25.564 1.00 9.14 ATOM 248 NH1 ARG 33 -3.683 41.460 25.784 1.00 9.14 ATOM 249 NH2 ARG 33 -3.632 43.676 26.602 1.00 9.14 ATOM 250 C ARG 33 -4.755 46.229 20.593 1.00 9.14 ATOM 251 O ARG 33 -5.317 46.997 21.370 1.00 9.14 ATOM 252 N PRO 34 -3.976 46.696 19.661 1.00 8.76 ATOM 253 CA PRO 34 -3.853 48.125 19.575 1.00 8.76 ATOM 254 CD PRO 34 -2.732 46.037 19.314 1.00 8.76 ATOM 255 CB PRO 34 -2.526 48.410 18.867 1.00 8.76 ATOM 256 CG PRO 34 -2.052 47.034 18.362 1.00 8.76 ATOM 257 C PRO 34 -5.055 48.817 18.992 1.00 8.76 ATOM 258 O PRO 34 -5.433 48.510 17.862 1.00 8.76 ATOM 259 N PHE 35 -5.634 49.775 19.748 1.00 8.79 ATOM 260 CA PHE 35 -6.738 50.637 19.386 1.00 8.79 ATOM 261 CB PHE 35 -7.932 49.936 18.713 1.00 8.79 ATOM 262 CG PHE 35 -8.731 51.025 18.077 1.00 8.79 ATOM 263 CD1 PHE 35 -8.349 51.526 16.854 1.00 8.79 ATOM 264 CD2 PHE 35 -9.843 51.555 18.692 1.00 8.79 ATOM 265 CE1 PHE 35 -9.071 52.531 16.255 1.00 8.79 ATOM 266 CE2 PHE 35 -10.570 52.561 18.100 1.00 8.79 ATOM 267 CZ PHE 35 -10.179 53.054 16.878 1.00 8.79 ATOM 268 C PHE 35 -7.197 51.219 20.712 1.00 8.79 ATOM 269 O PHE 35 -6.733 50.740 21.740 1.00 8.79 ATOM 270 N TRP 36 -8.074 52.265 20.769 1.00 8.87 ATOM 271 CA TRP 36 -8.482 52.770 22.074 1.00 8.87 ATOM 272 CB TRP 36 -7.479 53.743 22.716 1.00 8.87 ATOM 273 CG TRP 36 -6.249 53.091 23.298 1.00 8.87 ATOM 274 CD2 TRP 36 -5.037 52.822 22.577 1.00 8.87 ATOM 275 CD1 TRP 36 -6.048 52.647 24.573 1.00 8.87 ATOM 276 NE1 TRP 36 -4.786 52.120 24.694 1.00 8.87 ATOM 277 CE2 TRP 36 -4.152 52.220 23.474 1.00 8.87 ATOM 278 CE3 TRP 36 -4.685 53.057 21.278 1.00 8.87 ATOM 279 CZ2 TRP 36 -2.901 51.841 23.083 1.00 8.87 ATOM 280 CZ3 TRP 36 -3.422 52.672 20.889 1.00 8.87 ATOM 281 CH2 TRP 36 -2.548 52.076 21.773 1.00 8.87 ATOM 282 C TRP 36 -9.805 53.508 22.050 1.00 8.87 ATOM 283 O TRP 36 -10.289 53.902 20.991 1.00 8.87 ATOM 284 N ILE 37 -10.425 53.687 23.256 1.00 8.33 ATOM 285 CA ILE 37 -11.653 54.434 23.455 1.00 8.33 ATOM 286 CB ILE 37 -12.925 53.668 23.209 1.00 8.33 ATOM 287 CG1 ILE 37 -14.083 54.667 22.994 1.00 8.33 ATOM 288 CG2 ILE 37 -13.140 52.684 24.371 1.00 8.33 ATOM 289 CD1 ILE 37 -15.347 54.083 22.371 1.00 8.33 ATOM 290 C ILE 37 -11.668 54.998 24.866 1.00 8.33 ATOM 291 O ILE 37 -10.656 54.927 25.562 1.00 8.33 ATOM 292 N SER 38 -12.807 55.596 25.322 1.00 8.00 ATOM 293 CA SER 38 -12.876 56.258 26.609 1.00 8.00 ATOM 294 CB SER 38 -12.929 57.790 26.505 1.00 8.00 ATOM 295 OG SER 38 -11.700 58.283 25.994 1.00 8.00 ATOM 296 C SER 38 -14.073 55.829 27.412 1.00 8.00 ATOM 297 O SER 38 -14.805 54.914 27.039 1.00 8.00 ATOM 298 N SER 39 -14.289 56.513 28.566 1.00 7.61 ATOM 299 CA SER 39 -15.290 56.107 29.521 1.00 7.61 ATOM 300 CB SER 39 -14.709 55.825 30.915 1.00 7.61 ATOM 301 OG SER 39 -14.180 57.015 31.478 1.00 7.61 ATOM 302 C SER 39 -16.365 57.130 29.741 1.00 7.61 ATOM 303 O SER 39 -16.245 58.297 29.378 1.00 7.61 ATOM 304 N PHE 40 -17.479 56.664 30.351 1.00 7.11 ATOM 305 CA PHE 40 -18.600 57.482 30.714 1.00 7.11 ATOM 306 CB PHE 40 -19.650 57.662 29.604 1.00 7.11 ATOM 307 CG PHE 40 -19.022 58.526 28.562 1.00 7.11 ATOM 308 CD1 PHE 40 -19.077 59.897 28.671 1.00 7.11 ATOM 309 CD2 PHE 40 -18.364 57.973 27.487 1.00 7.11 ATOM 310 CE1 PHE 40 -18.498 60.706 27.723 1.00 7.11 ATOM 311 CE2 PHE 40 -17.782 58.778 26.534 1.00 7.11 ATOM 312 CZ PHE 40 -17.853 60.145 26.649 1.00 7.11 ATOM 313 C PHE 40 -19.259 56.839 31.895 1.00 7.11 ATOM 314 O PHE 40 -18.886 55.745 32.315 1.00 7.11 ATOM 315 N ILE 41 -20.275 57.510 32.470 1.00 6.71 ATOM 316 CA ILE 41 -20.885 57.002 33.663 1.00 6.71 ATOM 317 CB ILE 41 -21.027 58.041 34.740 1.00 6.71 ATOM 318 CG1 ILE 41 -21.527 57.410 36.051 1.00 6.71 ATOM 319 CG2 ILE 41 -21.933 59.164 34.212 1.00 6.71 ATOM 320 CD1 ILE 41 -21.470 58.371 37.239 1.00 6.71 ATOM 321 C ILE 41 -22.260 56.519 33.357 1.00 6.71 ATOM 322 O ILE 41 -23.044 57.177 32.678 1.00 6.71 ATOM 323 N GLY 42 -22.590 55.314 33.847 1.00 6.09 ATOM 324 CA GLY 42 -23.921 54.841 33.639 1.00 6.09 ATOM 325 C GLY 42 -23.874 53.354 33.598 1.00 6.09 ATOM 326 O GLY 42 -22.799 52.756 33.572 1.00 6.09 ATOM 327 N ARG 43 -25.068 52.732 33.611 1.00 5.63 ATOM 328 CA ARG 43 -25.205 51.311 33.520 1.00 5.63 ATOM 329 CB ARG 43 -24.836 50.788 32.121 1.00 5.63 ATOM 330 CG ARG 43 -25.742 51.360 31.025 1.00 5.63 ATOM 331 CD ARG 43 -25.328 50.960 29.608 1.00 5.63 ATOM 332 NE ARG 43 -26.168 49.798 29.207 1.00 5.63 ATOM 333 CZ ARG 43 -25.808 48.531 29.562 1.00 5.63 ATOM 334 NH1 ARG 43 -24.692 48.321 30.320 1.00 5.63 ATOM 335 NH2 ARG 43 -26.565 47.472 29.154 1.00 5.63 ATOM 336 C ARG 43 -24.321 50.695 34.549 1.00 5.63 ATOM 337 O ARG 43 -23.649 49.698 34.294 1.00 5.63 ATOM 338 N SER 44 -24.335 51.272 35.762 1.00 5.37 ATOM 339 CA SER 44 -23.516 50.807 36.842 1.00 5.37 ATOM 340 CB SER 44 -23.648 51.672 38.108 1.00 5.37 ATOM 341 OG SER 44 -24.960 51.571 38.639 1.00 5.37 ATOM 342 C SER 44 -23.954 49.423 37.197 1.00 5.37 ATOM 343 O SER 44 -23.251 48.702 37.902 1.00 5.37 ATOM 344 N LYS 45 -25.144 49.014 36.724 1.00 4.96 ATOM 345 CA LYS 45 -25.651 47.704 37.027 1.00 4.96 ATOM 346 CB LYS 45 -27.126 47.512 36.629 1.00 4.96 ATOM 347 CG LYS 45 -27.666 46.116 36.951 1.00 4.96 ATOM 348 CD LYS 45 -29.163 45.936 36.675 1.00 4.96 ATOM 349 CE LYS 45 -30.073 46.505 37.764 1.00 4.96 ATOM 350 NZ LYS 45 -31.487 46.232 37.427 1.00 4.96 ATOM 351 C LYS 45 -24.875 46.681 36.257 1.00 4.96 ATOM 352 O LYS 45 -24.215 46.992 35.268 1.00 4.96 TER END