####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS152_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS152_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 18 - 37 4.79 16.01 LONGEST_CONTINUOUS_SEGMENT: 20 19 - 38 4.93 15.39 LCS_AVERAGE: 42.46 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 19 - 28 1.99 19.12 LCS_AVERAGE: 17.15 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 20 - 27 0.46 18.20 LCS_AVERAGE: 11.47 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 8 14 3 4 4 5 7 9 10 11 13 16 17 18 21 22 23 27 27 32 34 35 LCS_GDT V 3 V 3 4 8 17 3 4 4 4 7 8 10 10 13 16 17 18 21 22 24 27 27 31 34 35 LCS_GDT Q 4 Q 4 5 8 19 3 4 5 6 10 13 15 15 16 17 20 23 26 29 30 32 34 35 36 36 LCS_GDT G 5 G 5 5 8 19 3 4 5 6 10 13 15 15 16 17 20 23 26 29 30 32 34 35 36 36 LCS_GDT P 6 P 6 5 8 19 2 4 5 6 10 13 15 15 16 17 20 23 26 29 30 32 34 35 36 36 LCS_GDT W 7 W 7 5 8 19 2 4 5 6 10 13 15 15 16 17 20 23 26 29 30 32 34 35 36 36 LCS_GDT V 8 V 8 5 8 19 0 3 5 6 10 13 15 15 16 17 20 23 26 29 30 32 34 35 36 36 LCS_GDT G 9 G 9 5 8 19 3 4 5 6 10 13 15 15 16 17 20 21 23 29 30 32 34 35 36 36 LCS_GDT S 10 S 10 5 6 19 4 4 5 5 9 13 15 15 16 17 20 23 26 29 30 32 34 35 36 36 LCS_GDT S 11 S 11 5 6 19 4 4 5 5 7 8 10 15 16 17 20 23 26 29 30 32 34 35 36 36 LCS_GDT Y 12 Y 12 5 6 19 4 4 5 5 10 13 15 15 16 17 20 23 26 29 30 32 34 35 36 36 LCS_GDT V 13 V 13 5 6 19 4 4 5 5 7 13 15 15 16 17 20 23 26 29 30 32 34 35 36 36 LCS_GDT A 14 A 14 4 5 19 4 4 5 5 6 8 9 11 13 16 18 23 26 29 30 32 34 35 36 36 LCS_GDT E 15 E 15 4 5 19 4 4 5 5 6 8 9 11 13 16 18 23 26 29 30 32 34 35 36 36 LCS_GDT T 16 T 16 4 5 19 4 4 5 5 6 8 9 11 13 16 18 23 26 29 30 32 34 35 36 36 LCS_GDT G 17 G 17 4 5 19 4 4 5 5 6 8 9 11 13 16 18 23 26 29 30 32 34 35 36 36 LCS_GDT Q 18 Q 18 4 5 20 3 4 5 5 6 8 8 11 13 16 18 23 26 29 30 32 34 35 36 36 LCS_GDT N 19 N 19 4 10 20 3 3 4 5 6 9 12 14 15 15 18 23 26 29 30 32 34 35 36 36 LCS_GDT W 20 W 20 8 10 20 7 8 8 10 10 10 12 14 15 15 16 23 26 29 30 32 34 35 36 36 LCS_GDT A 21 A 21 8 10 20 7 8 8 10 10 10 13 14 15 15 18 23 26 29 30 32 34 35 36 36 LCS_GDT S 22 S 22 8 10 20 7 8 8 10 10 10 13 14 15 16 18 23 26 29 30 32 34 35 36 36 LCS_GDT L 23 L 23 8 10 20 7 8 8 10 10 10 13 14 15 15 17 23 26 29 30 32 34 35 36 36 LCS_GDT A 24 A 24 8 10 20 7 8 8 10 10 10 13 14 15 15 16 18 20 23 27 30 34 35 36 36 LCS_GDT A 25 A 25 8 10 20 7 8 8 10 10 10 13 14 15 15 16 19 24 27 30 32 34 35 36 36 LCS_GDT N 26 N 26 8 10 20 7 8 8 10 10 10 13 14 15 15 16 18 20 26 27 30 34 35 36 36 LCS_GDT E 27 E 27 8 10 20 5 8 8 10 10 10 13 14 15 15 16 18 19 19 21 22 25 27 33 36 LCS_GDT L 28 L 28 3 10 20 1 4 5 9 9 10 13 14 15 15 16 18 19 19 20 21 23 23 26 26 LCS_GDT R 29 R 29 4 7 20 3 4 5 6 7 10 13 14 15 15 16 18 19 22 23 26 32 35 36 36 LCS_GDT V 30 V 30 4 7 20 3 4 4 5 7 10 13 14 15 15 16 18 19 22 26 30 34 35 36 36 LCS_GDT T 31 T 31 4 7 20 3 4 5 6 7 10 13 14 15 17 20 23 26 29 30 32 34 35 36 36 LCS_GDT E 32 E 32 4 7 20 3 4 5 6 10 13 15 15 16 17 20 23 26 29 30 32 34 35 36 36 LCS_GDT R 33 R 33 4 7 20 3 4 5 6 6 10 15 15 16 17 20 23 26 29 30 32 34 35 36 36 LCS_GDT P 34 P 34 4 7 20 2 4 5 6 10 13 15 15 16 17 20 21 23 29 30 32 34 35 36 36 LCS_GDT F 35 F 35 3 7 20 3 7 8 10 10 13 15 15 16 17 20 23 26 29 30 32 34 35 36 36 LCS_GDT W 36 W 36 5 7 20 4 4 6 10 10 13 15 15 16 17 20 23 26 29 30 32 34 35 36 36 LCS_GDT I 37 I 37 5 7 20 4 4 6 6 9 13 15 15 16 17 20 23 26 29 30 32 34 35 36 36 LCS_GDT S 38 S 38 5 7 20 4 4 6 6 7 8 10 11 14 15 20 23 25 29 30 32 34 35 36 36 LCS_GDT S 39 S 39 5 7 15 4 4 6 6 7 8 10 11 14 16 20 23 25 29 30 32 34 35 36 36 LCS_GDT F 40 F 40 5 7 15 4 4 6 6 7 8 10 11 16 17 20 23 26 29 30 32 34 35 36 36 LCS_GDT I 41 I 41 5 7 15 4 4 6 6 7 8 10 11 12 13 16 18 24 27 30 32 33 35 36 36 LCS_GDT G 42 G 42 4 7 15 3 4 4 6 7 8 10 11 11 13 15 16 17 19 22 23 24 26 29 35 LCS_GDT R 43 R 43 4 7 15 3 4 4 6 6 7 10 11 11 13 15 16 17 18 18 20 22 23 23 30 LCS_GDT S 44 S 44 4 7 15 3 4 4 6 6 7 10 11 11 13 15 16 17 18 18 19 19 19 20 20 LCS_GDT K 45 K 45 4 7 15 3 4 4 6 6 7 10 11 11 13 15 16 17 18 18 19 19 19 20 20 LCS_AVERAGE LCS_A: 23.69 ( 11.47 17.15 42.46 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 8 8 10 10 13 15 15 16 17 20 23 26 29 30 32 34 35 36 36 GDT PERCENT_AT 15.91 18.18 18.18 22.73 22.73 29.55 34.09 34.09 36.36 38.64 45.45 52.27 59.09 65.91 68.18 72.73 77.27 79.55 81.82 81.82 GDT RMS_LOCAL 0.32 0.46 0.46 1.02 1.02 2.29 2.51 2.51 2.68 2.95 3.70 4.78 5.03 5.29 5.38 5.60 5.99 6.08 6.27 6.27 GDT RMS_ALL_AT 17.61 18.20 18.20 16.99 16.99 11.87 11.68 11.68 11.60 11.50 11.12 9.88 9.72 9.73 9.64 9.54 9.54 9.49 9.51 9.51 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 6.865 0 0.629 0.610 7.601 4.545 3.636 - LGA V 3 V 3 6.274 0 0.044 0.933 11.259 1.364 0.779 9.834 LGA Q 4 Q 4 0.892 0 0.041 0.457 8.256 41.364 24.646 6.634 LGA G 5 G 5 1.871 0 0.349 0.349 4.295 44.091 44.091 - LGA P 6 P 6 2.041 0 0.068 0.184 3.057 35.455 32.208 2.770 LGA W 7 W 7 2.209 0 0.374 0.365 4.587 35.455 19.870 4.587 LGA V 8 V 8 2.772 0 0.642 1.371 6.000 20.909 14.286 4.096 LGA G 9 G 9 2.954 0 0.476 0.476 2.954 52.273 52.273 - LGA S 10 S 10 2.733 0 0.094 0.556 5.417 23.636 16.667 5.417 LGA S 11 S 11 4.801 0 0.063 0.666 5.836 5.909 4.242 4.823 LGA Y 12 Y 12 2.276 0 0.083 0.434 5.403 39.545 26.061 5.403 LGA V 13 V 13 3.595 0 0.562 0.901 5.858 12.273 8.312 4.851 LGA A 14 A 14 10.424 0 0.607 0.579 12.423 0.000 0.000 - LGA E 15 E 15 11.727 0 0.033 1.166 13.176 0.000 0.000 12.559 LGA T 16 T 16 11.463 0 0.155 0.270 12.675 0.000 0.000 9.588 LGA G 17 G 17 12.939 0 0.662 0.662 13.959 0.000 0.000 - LGA Q 18 Q 18 12.358 0 0.638 0.955 14.492 0.000 0.000 14.271 LGA N 19 N 19 13.468 0 0.072 1.038 18.080 0.000 0.000 16.845 LGA W 20 W 20 10.474 0 0.629 0.450 12.095 0.000 0.000 11.632 LGA A 21 A 21 9.245 0 0.044 0.042 10.208 0.000 0.000 - LGA S 22 S 22 9.162 0 0.029 0.060 12.353 0.000 0.000 8.611 LGA L 23 L 23 13.985 0 0.013 0.332 16.829 0.000 0.000 12.978 LGA A 24 A 24 15.716 0 0.018 0.023 16.960 0.000 0.000 - LGA A 25 A 25 13.697 0 0.027 0.026 16.406 0.000 0.000 - LGA N 26 N 26 17.825 0 0.043 0.821 21.380 0.000 0.000 15.162 LGA E 27 E 27 22.253 0 0.623 1.165 23.082 0.000 0.000 22.819 LGA L 28 L 28 22.913 0 0.682 0.657 28.831 0.000 0.000 27.790 LGA R 29 R 29 17.853 0 0.644 1.238 23.309 0.000 0.000 22.719 LGA V 30 V 30 12.813 0 0.086 1.000 15.106 0.000 0.000 14.001 LGA T 31 T 31 7.164 0 0.677 0.547 10.869 5.000 2.857 8.078 LGA E 32 E 32 2.670 0 0.171 0.993 10.060 29.091 13.131 10.060 LGA R 33 R 33 3.010 0 0.173 1.229 11.369 23.636 8.595 11.369 LGA P 34 P 34 2.124 0 0.658 0.636 4.657 26.364 29.870 2.083 LGA F 35 F 35 2.858 0 0.620 1.280 11.062 41.818 15.207 11.062 LGA W 36 W 36 1.424 0 0.631 0.476 9.299 78.182 24.805 9.299 LGA I 37 I 37 2.831 0 0.102 1.047 6.680 16.364 8.409 6.260 LGA S 38 S 38 7.497 0 0.103 0.646 9.723 0.000 0.000 9.723 LGA S 39 S 39 7.588 0 0.135 0.706 9.710 0.000 0.000 7.804 LGA F 40 F 40 5.843 0 0.087 0.869 8.272 0.000 2.975 7.478 LGA I 41 I 41 9.615 0 0.613 0.511 13.353 0.000 0.000 10.863 LGA G 42 G 42 15.773 0 0.560 0.560 18.795 0.000 0.000 - LGA R 43 R 43 17.914 0 0.642 1.246 20.251 0.000 0.000 18.786 LGA S 44 S 44 23.299 0 0.127 0.108 25.509 0.000 0.000 24.344 LGA K 45 K 45 27.967 0 0.051 1.012 31.017 0.000 0.000 30.376 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.183 9.276 10.215 12.211 8.021 2.182 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 2.51 36.932 31.191 0.575 LGA_LOCAL RMSD: 2.507 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.677 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.183 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.122316 * X + 0.790843 * Y + 0.599671 * Z + -11.703793 Y_new = 0.489556 * X + 0.573665 * Y + -0.656691 * Z + 55.959934 Z_new = -0.863350 * X + 0.213249 * Y + -0.457331 * Z + -22.673531 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.815634 1.041871 2.705275 [DEG: 104.0282 59.6948 155.0008 ] ZXZ: 0.740044 2.045788 -1.328642 [DEG: 42.4014 117.2150 -76.1256 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS152_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS152_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 2.51 31.191 9.18 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS152_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 12 N ALA 2 15.335 33.165 7.725 1.00 13.85 N ATOM 14 CA ALA 2 15.226 33.707 9.091 1.00 13.85 C ATOM 15 CB ALA 2 16.615 33.946 9.676 1.00 13.85 C ATOM 16 C ALA 2 14.411 35.008 9.116 1.00 13.85 C ATOM 17 O ALA 2 13.639 35.236 10.056 1.00 13.85 O ATOM 18 N VAL 3 14.594 35.843 8.082 1.00 11.59 N ATOM 20 CA VAL 3 13.904 37.141 7.927 1.00 11.59 C ATOM 21 CB VAL 3 14.892 38.297 7.488 1.00 11.59 C ATOM 22 CG1 VAL 3 15.728 38.740 8.679 1.00 11.59 C ATOM 23 CG2 VAL 3 15.820 37.855 6.333 1.00 11.59 C ATOM 24 C VAL 3 12.676 37.083 6.988 1.00 11.59 C ATOM 25 O VAL 3 12.696 36.357 5.984 1.00 11.59 O ATOM 26 N GLN 4 11.622 37.832 7.342 1.00 10.17 N ATOM 28 CA GLN 4 10.362 37.907 6.575 1.00 10.17 C ATOM 29 CB GLN 4 9.151 37.665 7.490 1.00 10.17 C ATOM 30 CG GLN 4 9.028 36.241 8.023 1.00 10.17 C ATOM 31 CD GLN 4 7.819 36.057 8.921 1.00 10.17 C ATOM 32 OE1 GLN 4 7.905 36.228 10.138 1.00 10.17 O ATOM 33 NE2 GLN 4 6.685 35.707 8.326 1.00 10.17 N ATOM 36 C GLN 4 10.212 39.260 5.867 1.00 10.17 C ATOM 37 O GLN 4 10.671 40.286 6.383 1.00 10.17 O ATOM 38 N GLY 5 9.579 39.241 4.691 1.00 7.81 N ATOM 40 CA GLY 5 9.364 40.451 3.907 1.00 7.81 C ATOM 41 C GLY 5 8.722 40.166 2.554 1.00 7.81 C ATOM 42 O GLY 5 7.505 39.947 2.528 1.00 7.81 O ATOM 43 N PRO 6 9.481 40.157 1.415 1.00 8.21 N ATOM 44 CD PRO 6 10.896 40.581 1.297 1.00 8.21 C ATOM 45 CA PRO 6 8.921 39.887 0.072 1.00 8.21 C ATOM 46 CB PRO 6 10.101 40.198 -0.861 1.00 8.21 C ATOM 47 CG PRO 6 11.322 39.966 -0.004 1.00 8.21 C ATOM 48 C PRO 6 8.336 38.471 -0.177 1.00 8.21 C ATOM 49 O PRO 6 7.491 38.297 -1.063 1.00 8.21 O ATOM 50 N TRP 7 8.795 37.493 0.617 1.00 9.00 N ATOM 52 CA TRP 7 8.361 36.086 0.533 1.00 9.00 C ATOM 53 CB TRP 7 9.584 35.140 0.541 1.00 9.00 C ATOM 54 CG TRP 7 10.568 35.287 -0.646 1.00 9.00 C ATOM 55 CD2 TRP 7 10.500 34.630 -1.934 1.00 9.00 C ATOM 56 CE2 TRP 7 11.642 35.046 -2.675 1.00 9.00 C ATOM 57 CE3 TRP 7 9.587 33.732 -2.534 1.00 9.00 C ATOM 58 CD1 TRP 7 11.716 36.045 -0.672 1.00 9.00 C ATOM 59 NE1 TRP 7 12.357 35.902 -1.879 1.00 9.00 N ATOM 61 CZ2 TRP 7 11.903 34.596 -3.992 1.00 9.00 C ATOM 62 CZ3 TRP 7 9.844 33.280 -3.853 1.00 9.00 C ATOM 63 CH2 TRP 7 10.999 33.719 -4.563 1.00 9.00 C ATOM 64 C TRP 7 7.400 35.706 1.672 1.00 9.00 C ATOM 65 O TRP 7 7.567 36.172 2.807 1.00 9.00 O ATOM 66 N VAL 8 6.398 34.876 1.347 1.00 10.26 N ATOM 68 CA VAL 8 5.373 34.395 2.296 1.00 10.26 C ATOM 69 CB VAL 8 3.899 34.714 1.809 1.00 10.26 C ATOM 70 CG1 VAL 8 3.593 36.188 2.025 1.00 10.26 C ATOM 71 CG2 VAL 8 3.691 34.353 0.319 1.00 10.26 C ATOM 72 C VAL 8 5.527 32.897 2.631 1.00 10.26 C ATOM 73 O VAL 8 5.887 32.097 1.758 1.00 10.26 O ATOM 74 N GLY 9 5.275 32.547 3.898 1.00 8.48 N ATOM 76 CA GLY 9 5.384 31.167 4.353 1.00 8.48 C ATOM 77 C GLY 9 4.137 30.675 5.070 1.00 8.48 C ATOM 78 O GLY 9 3.176 31.435 5.236 1.00 8.48 O ATOM 79 N SER 10 4.164 29.400 5.478 1.00 7.76 N ATOM 81 CA SER 10 3.063 28.733 6.191 1.00 7.76 C ATOM 82 CB SER 10 2.571 27.516 5.388 1.00 7.76 C ATOM 83 OG SER 10 2.101 27.903 4.107 1.00 7.76 O ATOM 85 C SER 10 3.510 28.291 7.599 1.00 7.76 C ATOM 86 O SER 10 2.686 27.837 8.405 1.00 7.76 O ATOM 87 N SER 11 4.805 28.483 7.893 1.00 7.13 N ATOM 89 CA SER 11 5.444 28.119 9.176 1.00 7.13 C ATOM 90 OG SER 11 7.408 29.437 8.572 1.00 7.13 O ATOM 92 C SER 11 5.005 28.927 10.414 1.00 7.13 C ATOM 93 O SER 11 4.862 28.352 11.501 1.00 7.13 O ATOM 94 CB SER 11 6.972 28.169 9.036 1.00 7.13 C ATOM 95 N TYR 12 4.796 30.241 10.239 1.00 6.61 N ATOM 97 CA TYR 12 4.375 31.166 11.315 1.00 6.61 C ATOM 98 CB TYR 12 4.611 32.646 10.900 1.00 6.61 C ATOM 99 CG TYR 12 4.092 33.102 9.526 1.00 6.61 C ATOM 100 CD1 TYR 12 2.769 33.584 9.365 1.00 6.61 C ATOM 101 CE1 TYR 12 2.300 34.048 8.104 1.00 6.61 C ATOM 102 CD2 TYR 12 4.937 33.098 8.390 1.00 6.61 C ATOM 103 CE2 TYR 12 4.477 33.560 7.125 1.00 6.61 C ATOM 104 CZ TYR 12 3.161 34.031 6.995 1.00 6.61 C ATOM 105 OH TYR 12 2.715 34.479 5.772 1.00 6.61 O ATOM 107 C TYR 12 2.944 30.967 11.857 1.00 6.61 C ATOM 108 O TYR 12 2.749 30.934 13.077 1.00 6.61 O ATOM 109 N VAL 13 1.973 30.799 10.938 1.00 6.17 N ATOM 111 CA VAL 13 0.515 30.588 11.183 1.00 6.17 C ATOM 112 CB VAL 13 0.155 29.027 11.367 1.00 6.17 C ATOM 113 CG1 VAL 13 0.638 28.468 12.720 1.00 6.17 C ATOM 114 CG2 VAL 13 -1.341 28.753 11.130 1.00 6.17 C ATOM 115 C VAL 13 -0.195 31.510 12.226 1.00 6.17 C ATOM 116 O VAL 13 0.384 31.838 13.268 1.00 6.17 O ATOM 117 N ALA 14 -1.446 31.887 11.925 1.00 5.27 N ATOM 119 CA ALA 14 -2.272 32.752 12.786 1.00 5.27 C ATOM 120 CB ALA 14 -2.815 33.939 11.983 1.00 5.27 C ATOM 121 C ALA 14 -3.426 31.963 13.431 1.00 5.27 C ATOM 122 O ALA 14 -4.228 31.336 12.724 1.00 5.27 O ATOM 123 N GLU 15 -3.470 31.979 14.771 1.00 5.99 N ATOM 125 CA GLU 15 -4.484 31.286 15.597 1.00 5.99 C ATOM 126 CB GLU 15 -4.034 31.227 17.064 1.00 5.99 C ATOM 127 CG GLU 15 -2.840 30.313 17.330 1.00 5.99 C ATOM 128 CD GLU 15 -2.435 30.289 18.793 1.00 5.99 C ATOM 129 OE1 GLU 15 -2.957 29.437 19.542 1.00 5.99 O ATOM 130 OE2 GLU 15 -1.592 31.120 19.192 1.00 5.99 O ATOM 131 C GLU 15 -5.914 31.856 15.520 1.00 5.99 C ATOM 132 O GLU 15 -6.883 31.088 15.526 1.00 5.99 O ATOM 133 N THR 16 -6.025 33.191 15.444 1.00 6.95 N ATOM 135 CA THR 16 -7.312 33.921 15.376 1.00 6.95 C ATOM 136 CB THR 16 -7.127 35.443 15.662 1.00 6.95 C ATOM 137 OG1 THR 16 -6.086 35.969 14.828 1.00 6.95 O ATOM 139 CG2 THR 16 -6.778 35.681 17.127 1.00 6.95 C ATOM 140 C THR 16 -8.116 33.736 14.072 1.00 6.95 C ATOM 141 O THR 16 -9.326 33.488 14.124 1.00 6.95 O ATOM 142 N GLY 17 -7.434 33.836 12.923 1.00 6.68 N ATOM 144 CA GLY 17 -8.070 33.679 11.618 1.00 6.68 C ATOM 145 C GLY 17 -8.591 34.972 11.003 1.00 6.68 C ATOM 146 O GLY 17 -8.842 35.941 11.728 1.00 6.68 O ATOM 147 N GLN 18 -8.746 34.973 9.672 1.00 5.08 N ATOM 149 CA GLN 18 -9.240 36.121 8.884 1.00 5.08 C ATOM 150 CB GLN 18 -8.978 35.900 7.386 1.00 5.08 C ATOM 151 CG GLN 18 -7.508 35.944 6.982 1.00 5.08 C ATOM 152 CD GLN 18 -7.305 35.721 5.496 1.00 5.08 C ATOM 153 OE1 GLN 18 -7.284 36.670 4.711 1.00 5.08 O ATOM 154 NE2 GLN 18 -7.157 34.462 5.100 1.00 5.08 N ATOM 157 C GLN 18 -10.728 36.462 9.105 1.00 5.08 C ATOM 158 O GLN 18 -11.085 37.644 9.191 1.00 5.08 O ATOM 159 N ASN 19 -11.568 35.420 9.217 1.00 5.26 N ATOM 161 CA ASN 19 -13.028 35.535 9.428 1.00 5.26 C ATOM 162 CB ASN 19 -13.701 34.163 9.212 1.00 5.26 C ATOM 163 CG ASN 19 -15.138 34.274 8.697 1.00 5.26 C ATOM 164 OD1 ASN 19 -15.377 34.290 7.488 1.00 5.26 O ATOM 165 ND2 ASN 19 -16.096 34.334 9.617 1.00 5.26 N ATOM 168 C ASN 19 -13.376 36.101 10.824 1.00 5.26 C ATOM 169 O ASN 19 -14.211 37.007 10.932 1.00 5.26 O ATOM 170 N TRP 20 -12.705 35.582 11.864 1.00 5.44 N ATOM 172 CA TRP 20 -12.892 36.000 13.270 1.00 5.44 C ATOM 173 CB TRP 20 -12.178 35.021 14.227 1.00 5.44 C ATOM 174 CG TRP 20 -12.712 33.567 14.235 1.00 5.44 C ATOM 175 CD2 TRP 20 -13.779 33.024 15.049 1.00 5.44 C ATOM 176 CE2 TRP 20 -13.880 31.639 14.733 1.00 5.44 C ATOM 177 CE3 TRP 20 -14.657 33.570 16.013 1.00 5.44 C ATOM 178 CD1 TRP 20 -12.237 32.513 13.488 1.00 5.44 C ATOM 179 NE1 TRP 20 -12.932 31.364 13.785 1.00 5.44 N ATOM 181 CZ2 TRP 20 -14.829 30.785 15.348 1.00 5.44 C ATOM 182 CZ3 TRP 20 -15.607 32.718 16.629 1.00 5.44 C ATOM 183 CH2 TRP 20 -15.679 31.338 16.288 1.00 5.44 C ATOM 184 C TRP 20 -12.389 37.434 13.512 1.00 5.44 C ATOM 185 O TRP 20 -13.009 38.191 14.268 1.00 5.44 O ATOM 186 N ALA 21 -11.280 37.788 12.845 1.00 5.03 N ATOM 188 CA ALA 21 -10.639 39.117 12.915 1.00 5.03 C ATOM 189 CB ALA 21 -9.261 39.070 12.265 1.00 5.03 C ATOM 190 C ALA 21 -11.506 40.201 12.251 1.00 5.03 C ATOM 191 O ALA 21 -11.624 41.314 12.781 1.00 5.03 O ATOM 192 N SER 22 -12.115 39.852 11.107 1.00 4.44 N ATOM 194 CA SER 22 -13.003 40.738 10.327 1.00 4.44 C ATOM 195 CB SER 22 -13.275 40.145 8.937 1.00 4.44 C ATOM 196 OG SER 22 -13.789 38.827 9.022 1.00 4.44 O ATOM 198 C SER 22 -14.324 41.030 11.063 1.00 4.44 C ATOM 199 O SER 22 -14.766 42.184 11.108 1.00 4.44 O ATOM 200 N LEU 23 -14.919 39.982 11.659 1.00 4.81 N ATOM 202 CA LEU 23 -16.176 40.067 12.431 1.00 4.81 C ATOM 203 CB LEU 23 -16.738 38.664 12.739 1.00 4.81 C ATOM 204 CG LEU 23 -17.377 37.772 11.655 1.00 4.81 C ATOM 205 CD1 LEU 23 -17.115 36.316 12.006 1.00 4.81 C ATOM 206 CD2 LEU 23 -18.891 38.016 11.495 1.00 4.81 C ATOM 207 C LEU 23 -15.984 40.855 13.740 1.00 4.81 C ATOM 208 O LEU 23 -16.877 41.604 14.149 1.00 4.81 O ATOM 209 N ALA 24 -14.814 40.668 14.373 1.00 5.38 N ATOM 211 CA ALA 24 -14.419 41.344 15.627 1.00 5.38 C ATOM 212 CB ALA 24 -13.183 40.676 16.217 1.00 5.38 C ATOM 213 C ALA 24 -14.164 42.848 15.422 1.00 5.38 C ATOM 214 O ALA 24 -14.539 43.662 16.274 1.00 5.38 O ATOM 215 N ALA 25 -13.530 43.190 14.289 1.00 5.41 N ATOM 217 CA ALA 25 -13.196 44.574 13.893 1.00 5.41 C ATOM 218 CB ALA 25 -12.208 44.565 12.726 1.00 5.41 C ATOM 219 C ALA 25 -14.431 45.425 13.540 1.00 5.41 C ATOM 220 O ALA 25 -14.539 46.572 13.986 1.00 5.41 O ATOM 221 N ASN 26 -15.343 44.849 12.741 1.00 5.07 N ATOM 223 CA ASN 26 -16.600 45.490 12.296 1.00 5.07 C ATOM 224 CB ASN 26 -17.218 44.711 11.126 1.00 5.07 C ATOM 225 CG ASN 26 -16.457 44.905 9.819 1.00 5.07 C ATOM 226 OD1 ASN 26 -15.540 44.146 9.500 1.00 5.07 O ATOM 227 ND2 ASN 26 -16.851 45.914 9.047 1.00 5.07 N ATOM 230 C ASN 26 -17.653 45.698 13.401 1.00 5.07 C ATOM 231 O ASN 26 -18.351 46.718 13.404 1.00 5.07 O ATOM 232 N GLU 27 -17.744 44.732 14.328 1.00 5.18 N ATOM 234 CA GLU 27 -18.696 44.740 15.460 1.00 5.18 C ATOM 235 CG GLU 27 -19.916 42.553 14.829 1.00 5.18 C ATOM 236 CD GLU 27 -20.248 41.138 15.262 1.00 5.18 C ATOM 237 OE1 GLU 27 -19.469 40.216 14.935 1.00 5.18 O ATOM 238 OE2 GLU 27 -21.287 40.945 15.928 1.00 5.18 O ATOM 239 C GLU 27 -18.189 45.523 16.693 1.00 5.18 C ATOM 240 O GLU 27 -17.092 46.091 16.652 1.00 5.18 O ATOM 241 CB GLU 27 -19.059 43.298 15.852 1.00 5.18 C ATOM 242 N LEU 28 -18.994 45.540 17.770 1.00 5.74 N ATOM 244 CA LEU 28 -18.698 46.236 19.043 1.00 5.74 C ATOM 245 CB LEU 28 -20.001 46.431 19.854 1.00 5.74 C ATOM 246 CG LEU 28 -21.115 47.384 19.378 1.00 5.74 C ATOM 247 CD1 LEU 28 -22.464 46.700 19.540 1.00 5.74 C ATOM 248 CD2 LEU 28 -21.094 48.717 20.141 1.00 5.74 C ATOM 249 C LEU 28 -17.628 45.522 19.901 1.00 5.74 C ATOM 250 O LEU 28 -17.022 44.550 19.434 1.00 5.74 O ATOM 251 N ARG 29 -17.399 46.016 21.134 1.00 5.96 N ATOM 253 CA ARG 29 -16.411 45.503 22.128 1.00 5.96 C ATOM 254 CB ARG 29 -16.736 44.056 22.576 1.00 5.96 C ATOM 255 CG ARG 29 -18.025 43.911 23.386 1.00 5.96 C ATOM 256 CD ARG 29 -18.291 42.465 23.799 1.00 5.96 C ATOM 257 NE ARG 29 -17.342 41.975 24.805 1.00 5.96 N ATOM 259 CZ ARG 29 -17.349 40.753 25.337 1.00 5.96 C ATOM 260 NH1 ARG 29 -18.257 39.850 24.978 1.00 5.96 N ATOM 263 NH2 ARG 29 -16.435 40.428 26.242 1.00 5.96 N ATOM 266 C ARG 29 -14.946 45.645 21.648 1.00 5.96 C ATOM 267 O ARG 29 -14.681 46.472 20.767 1.00 5.96 O ATOM 268 N VAL 30 -14.016 44.857 22.214 1.00 7.39 N ATOM 270 CA VAL 30 -12.579 44.885 21.853 1.00 7.39 C ATOM 271 CB VAL 30 -11.683 44.090 22.884 1.00 7.39 C ATOM 272 CG1 VAL 30 -11.530 44.896 24.165 1.00 7.39 C ATOM 273 CG2 VAL 30 -12.275 42.700 23.209 1.00 7.39 C ATOM 274 C VAL 30 -12.276 44.461 20.392 1.00 7.39 C ATOM 275 O VAL 30 -12.618 43.343 19.975 1.00 7.39 O ATOM 276 N THR 31 -11.688 45.391 19.626 1.00 7.60 N ATOM 278 CA THR 31 -11.335 45.199 18.206 1.00 7.60 C ATOM 279 CB THR 31 -11.805 46.410 17.330 1.00 7.60 C ATOM 280 OG1 THR 31 -11.326 47.635 17.900 1.00 7.60 O ATOM 282 CG2 THR 31 -13.326 46.454 17.236 1.00 7.60 C ATOM 283 C THR 31 -9.833 44.949 17.963 1.00 7.60 C ATOM 284 O THR 31 -8.983 45.495 18.682 1.00 7.60 O ATOM 285 N GLU 32 -9.536 44.097 16.971 1.00 7.01 N ATOM 287 CA GLU 32 -8.167 43.730 16.559 1.00 7.01 C ATOM 288 CB GLU 32 -7.961 42.192 16.611 1.00 7.01 C ATOM 289 CG GLU 32 -9.064 41.307 15.989 1.00 7.01 C ATOM 290 CD GLU 32 -8.773 39.825 16.137 1.00 7.01 C ATOM 291 OE1 GLU 32 -9.204 39.231 17.148 1.00 7.01 O ATOM 292 OE2 GLU 32 -8.116 39.254 15.241 1.00 7.01 O ATOM 293 C GLU 32 -7.852 44.319 15.162 1.00 7.01 C ATOM 294 O GLU 32 -8.679 45.062 14.618 1.00 7.01 O ATOM 295 N ARG 33 -6.670 44.007 14.609 1.00 7.07 N ATOM 297 CA ARG 33 -6.233 44.492 13.285 1.00 7.07 C ATOM 298 CB ARG 33 -4.837 45.140 13.375 1.00 7.07 C ATOM 299 CG ARG 33 -4.787 46.441 14.183 1.00 7.07 C ATOM 300 CD ARG 33 -3.373 47.007 14.292 1.00 7.07 C ATOM 301 NE ARG 33 -2.495 46.189 15.134 1.00 7.07 N ATOM 303 CZ ARG 33 -1.213 46.452 15.392 1.00 7.07 C ATOM 304 NH1 ARG 33 -0.522 45.634 16.173 1.00 7.07 N ATOM 307 NH2 ARG 33 -0.614 47.523 14.881 1.00 7.07 N ATOM 310 C ARG 33 -6.263 43.374 12.200 1.00 7.07 C ATOM 311 O ARG 33 -5.307 42.589 12.100 1.00 7.07 O ATOM 312 N PRO 34 -7.380 43.254 11.411 1.00 5.85 N ATOM 313 CD PRO 34 -8.708 43.878 11.640 1.00 5.85 C ATOM 314 CA PRO 34 -7.484 42.219 10.355 1.00 5.85 C ATOM 315 CB PRO 34 -8.997 42.111 10.131 1.00 5.85 C ATOM 316 CG PRO 34 -9.492 43.501 10.412 1.00 5.85 C ATOM 317 C PRO 34 -6.725 42.496 9.029 1.00 5.85 C ATOM 318 O PRO 34 -6.368 41.556 8.308 1.00 5.85 O ATOM 319 N PHE 35 -6.494 43.786 8.745 1.00 6.28 N ATOM 321 CA PHE 35 -5.807 44.276 7.531 1.00 6.28 C ATOM 322 CB PHE 35 -6.008 45.807 7.385 1.00 6.28 C ATOM 323 CG PHE 35 -7.455 46.246 7.168 1.00 6.28 C ATOM 324 CD1 PHE 35 -8.287 46.568 8.268 1.00 6.28 C ATOM 325 CD2 PHE 35 -7.986 46.378 5.861 1.00 6.28 C ATOM 326 CE1 PHE 35 -9.623 47.016 8.073 1.00 6.28 C ATOM 327 CE2 PHE 35 -9.319 46.824 5.651 1.00 6.28 C ATOM 328 CZ PHE 35 -10.141 47.143 6.760 1.00 6.28 C ATOM 329 C PHE 35 -4.308 43.933 7.431 1.00 6.28 C ATOM 330 O PHE 35 -3.837 43.551 6.353 1.00 6.28 O ATOM 331 N TRP 36 -3.585 44.057 8.554 1.00 5.27 N ATOM 333 CA TRP 36 -2.137 43.771 8.649 1.00 5.27 C ATOM 334 CB TRP 36 -1.567 44.314 9.978 1.00 5.27 C ATOM 335 CG TRP 36 -1.593 45.853 10.147 1.00 5.27 C ATOM 336 CD2 TRP 36 -0.568 46.799 9.762 1.00 5.27 C ATOM 337 CE2 TRP 36 -1.025 48.090 10.151 1.00 5.27 C ATOM 338 CE3 TRP 36 0.691 46.683 9.128 1.00 5.27 C ATOM 339 CD1 TRP 36 -2.591 46.600 10.732 1.00 5.27 C ATOM 340 NE1 TRP 36 -2.253 47.931 10.735 1.00 5.27 N ATOM 342 CZ2 TRP 36 -0.268 49.267 9.927 1.00 5.27 C ATOM 343 CZ3 TRP 36 1.451 47.858 8.902 1.00 5.27 C ATOM 344 CH2 TRP 36 0.960 49.132 9.306 1.00 5.27 C ATOM 345 C TRP 36 -1.788 42.278 8.496 1.00 5.27 C ATOM 346 O TRP 36 -0.811 41.938 7.817 1.00 5.27 O ATOM 347 N ILE 37 -2.605 41.410 9.113 1.00 5.08 N ATOM 349 CA ILE 37 -2.448 39.937 9.078 1.00 5.08 C ATOM 350 CB ILE 37 -3.378 39.208 10.162 1.00 5.08 C ATOM 351 CG2 ILE 37 -2.966 37.716 10.345 1.00 5.08 C ATOM 352 CG1 ILE 37 -3.448 39.987 11.510 1.00 5.08 C ATOM 353 CD1 ILE 37 -2.165 40.075 12.432 1.00 5.08 C ATOM 354 C ILE 37 -2.750 39.412 7.652 1.00 5.08 C ATOM 355 O ILE 37 -2.008 38.569 7.135 1.00 5.08 O ATOM 356 N SER 38 -3.798 39.967 7.022 1.00 5.34 N ATOM 358 CA SER 38 -4.242 39.607 5.659 1.00 5.34 C ATOM 359 CB SER 38 -5.609 40.232 5.358 1.00 5.34 C ATOM 360 OG SER 38 -6.591 39.774 6.270 1.00 5.34 O ATOM 362 C SER 38 -3.221 40.033 4.589 1.00 5.34 C ATOM 363 O SER 38 -2.974 39.288 3.635 1.00 5.34 O ATOM 364 N SER 39 -2.645 41.234 4.768 1.00 4.89 N ATOM 366 CA SER 39 -1.622 41.817 3.877 1.00 4.89 C ATOM 367 CB SER 39 -1.422 43.304 4.189 1.00 4.89 C ATOM 368 OG SER 39 -2.596 44.049 3.912 1.00 4.89 O ATOM 370 C SER 39 -0.275 41.076 3.966 1.00 4.89 C ATOM 371 O SER 39 0.415 40.916 2.952 1.00 4.89 O ATOM 372 N PHE 40 0.076 40.635 5.186 1.00 5.07 N ATOM 374 CA PHE 40 1.324 39.899 5.489 1.00 5.07 C ATOM 375 CB PHE 40 1.546 39.842 7.027 1.00 5.07 C ATOM 376 CG PHE 40 3.011 39.715 7.466 1.00 5.07 C ATOM 377 CD1 PHE 40 3.793 40.867 7.722 1.00 5.07 C ATOM 378 CD2 PHE 40 3.600 38.443 7.661 1.00 5.07 C ATOM 379 CE1 PHE 40 5.140 40.758 8.166 1.00 5.07 C ATOM 380 CE2 PHE 40 4.947 38.317 8.104 1.00 5.07 C ATOM 381 CZ PHE 40 5.718 39.478 8.357 1.00 5.07 C ATOM 382 C PHE 40 1.345 38.477 4.880 1.00 5.07 C ATOM 383 O PHE 40 2.351 38.086 4.277 1.00 5.07 O ATOM 384 N ILE 41 0.244 37.725 5.047 1.00 5.03 N ATOM 386 CA ILE 41 0.087 36.349 4.517 1.00 5.03 C ATOM 387 CB ILE 41 -1.121 35.576 5.197 1.00 5.03 C ATOM 388 CG2 ILE 41 -1.181 34.097 4.700 1.00 5.03 C ATOM 389 CG1 ILE 41 -0.956 35.574 6.730 1.00 5.03 C ATOM 390 CD1 ILE 41 -2.263 35.453 7.540 1.00 5.03 C ATOM 391 C ILE 41 -0.042 36.356 2.974 1.00 5.03 C ATOM 392 O ILE 41 0.496 35.467 2.302 1.00 5.03 O ATOM 393 N GLY 42 -0.739 37.365 2.443 1.00 5.11 N ATOM 395 CA GLY 42 -0.938 37.494 1.005 1.00 5.11 C ATOM 396 C GLY 42 -1.816 38.679 0.639 1.00 5.11 C ATOM 397 O GLY 42 -3.017 38.674 0.935 1.00 5.11 O ATOM 398 N ARG 43 -1.209 39.684 -0.005 1.00 4.61 N ATOM 400 CA ARG 43 -1.888 40.916 -0.443 1.00 4.61 C ATOM 401 CB ARG 43 -1.115 42.176 0.019 1.00 4.61 C ATOM 402 CG ARG 43 0.412 42.191 -0.208 1.00 4.61 C ATOM 403 CD ARG 43 1.033 43.486 0.293 1.00 4.61 C ATOM 404 NE ARG 43 2.483 43.519 0.087 1.00 4.61 N ATOM 406 CZ ARG 43 3.285 44.529 0.428 1.00 4.61 C ATOM 407 NH1 ARG 43 2.803 45.626 1.005 1.00 4.61 N ATOM 410 NH2 ARG 43 4.585 44.439 0.188 1.00 4.61 N ATOM 413 C ARG 43 -2.163 40.958 -1.960 1.00 4.61 C ATOM 414 O ARG 43 -3.164 41.543 -2.394 1.00 4.61 O ATOM 415 N SER 44 -1.277 40.316 -2.742 1.00 5.14 N ATOM 417 CA SER 44 -1.312 40.209 -4.227 1.00 5.14 C ATOM 418 CB SER 44 -2.428 39.258 -4.706 1.00 5.14 C ATOM 419 OG SER 44 -2.243 37.952 -4.191 1.00 5.14 O ATOM 421 C SER 44 -1.359 41.532 -5.020 1.00 5.14 C ATOM 422 O SER 44 -2.176 42.414 -4.719 1.00 5.14 O ATOM 423 N LYS 45 -0.466 41.652 -6.013 1.00 5.91 N ATOM 425 CA LYS 45 -0.348 42.837 -6.887 1.00 5.91 C ATOM 426 CG LYS 45 2.260 42.418 -6.988 1.00 5.91 C ATOM 427 CD LYS 45 3.607 43.130 -6.933 1.00 5.91 C ATOM 428 CE LYS 45 4.778 42.160 -7.070 1.00 5.91 C ATOM 429 NZ LYS 45 4.890 41.545 -8.427 1.00 5.91 N ATOM 433 C LYS 45 -0.803 42.559 -8.335 1.00 5.91 C ATOM 434 O LYS 45 -0.867 41.395 -8.749 1.00 5.91 O ATOM 435 CB LYS 45 1.089 43.418 -6.849 1.00 5.91 C TER END